RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HSF2BPO75031 334 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 TYMPP19971 482 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 BRCC3P46736 316 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 ADCY2Q08462 1091 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 DSC1Q08554 894 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 ADIGQ0VDE8 80 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 SH3PXD2AQ5TCZ1 1133 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 FAM35AQ86V20 835 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 MAP7D3Q8IWC1 876 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 THEM5Q8N1Q8 247 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 TTC13Q8NBP0 860 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 CLEC4CQ8WTT0 213 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 TEKT4Q8WW24 435 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 HSPH1Q92598 858 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 SEPT8Q92599 483 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 SMARCD1Q96GM5 515 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 I3L4J1 428 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 MYCP01106 439 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 RPL21P46778 160 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 MAP3K7CLP57077 242 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 CALCOCO2Q13137 446 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 PTK6Q13882 451 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 BYSLQ13895 437 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 MAPRE1Q15691 268 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 CCDC142Q17RM4 750 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 SIX6OS1Q8N1H7 587 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 HASPINQ8TF76 798 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 FAM193BQ96PV7 902 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 RUFY1Q96T51 708 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 ZDHHC18Q9NUE0 388 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 MTRF1LQ9UGC7 380 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 TMEM189-UBE2V1I3L0A0 370 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 LIASO43766 372 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 AP1G2O75843 785 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 BEST1O76090 585 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 FBXO21O94952 628 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 OAS2P29728 719 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 PLTPP55058 493 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 MRPS5P82675 430 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 RNASELQ05823 741 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 MTMR3Q13615 1198 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 PDK2Q15119 407 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 INTS6LQ5JSJ4 861 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 OVOS1Q6IE37 1185 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 FAM171BQ6P995 826 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 DBF4BQ8NFT6 615 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 CENPIQ92674 756 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 PEBP4Q96S96 227 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 C11orf84Q9BUA3 381 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 DDX23Q9BUQ8 820 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 GRHL1Q9NZI5 618 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 WHRNQ9P202 907 aa17.19■□□□□ 0.34
PHGDH-216ENST00000641375 DRG1Q9Y295 367 aaKnown RBP17.19■□□□□ 0.34
PHGDH-216ENST00000641375 ENPP3O14638 875 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 MDM4O15151 490 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 PQBP1O60828 265 aaKnown RBP17.18■□□□□ 0.34
PHGDH-216ENST00000641375 ENDOD1O94919 500 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 MATKP42679 507 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 CFAP58Q5T655 872 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 SCYL2Q6P3W7 929 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 BBS12Q6ZW61 710 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 CYP4V2Q6ZWL3 525 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-216ENST00000641375 ZNF365Q70YC5 407 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 VSIG1Q86XK7 387 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 ABI1Q8IZP0 508 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 CCDC89Q8N998 374 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 FAM71BQ8TC56 605 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 CCHCR1Q8TD31 782 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 RTP3Q9BQQ7 232 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 CALN1Q9BXU9 219 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 TBC1D13Q9NVG8 400 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 ASIC3Q9UHC3 531 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 PCDHB8Q9UN66 801 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 PCDHB7Q9Y5E2 793 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 ERICH4A6NGS2 130 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 CST8O60676 142 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 DDHD2O94830 711 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 PARNO95453 639 aaKnown RBP17.18■□□□□ 0.34
PHGDH-216ENST00000641375 ITIH2P19823 946 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 CDH6P55285 790 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 YWHAZP63104 245 aaKnown RBP17.18■□□□□ 0.34
PHGDH-216ENST00000641375 TSPY1Q01534 308 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 STRADAQ7RTN6 431 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 ZNF280BQ86YH2 543 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 COLGALT2Q8IYK4 626 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 FAM149B1Q96BN6 582 aa17.18■□□□□ 0.34
PHGDH-216ENST00000641375 MAK16Q9BXY0 300 aaKnown RBP17.18■□□□□ 0.34
PHGDH-216ENST00000641375 TANC1Q9C0D5 1861 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 H3BQF6 201 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 TRAPPC3O43617 180 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 DAB1O75553 588 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 ITGB1P05556 798 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 GGCXP38435 758 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 TKTL1P51854 596 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 HDAC4P56524 1084 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 YWHAHQ04917 246 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-216ENST00000641375 ADCY1Q08828 1119 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms