RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 LRRTM3Q86VH5 581 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 DDX42Q86XP3 938 aaKnown RBP eCLIP22.34■■□□□ 1.17
SPIN3-244ENST00000640728 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.34■■□□□ 1.17
SPIN3-244ENST00000640728 SLCO2A1Q92959 643 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 SMARCD1Q96GM5 515 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 KCNK16Q96T55 309 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 DDX23Q9BUQ8 820 aaKnown RBP22.34■■□□□ 1.17
SPIN3-244ENST00000640728 NRDE2Q9H7Z3 1164 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 CSNK1G1Q9HCP0 422 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 TMLHEQ9NVH6 421 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 TBX21Q9UL17 535 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 EFR3BQ9Y2G0 817 aa22.34■■□□□ 1.17
SPIN3-244ENST00000640728 PRG3Q9Y2Y8 225 aaPredicted RBP22.34■■□□□ 1.17
SPIN3-244ENST00000640728 TJP3O95049 919 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 ECHS1P30084 290 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 NDUFV1P49821 464 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 CCNG2Q16589 344 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 CDO1Q16878 200 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 FAM172AQ8WUF8 416 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 ATG4AQ8WYN0 398 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 CENPIQ92674 756 aaPredicted RBP22.33■■□□□ 1.17
SPIN3-244ENST00000640728 GDAP1L1Q96MZ0 367 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 TMEM209Q96SK2 561 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 NCAPGQ9BPX3 1015 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 RASAL2Q9UJF2 1139 aa22.33■■□□□ 1.17
SPIN3-244ENST00000640728 DAPK3O43293 454 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 HOXA2O43364 376 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 GJA8P48165 433 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 DRG2P55039 364 aaKnown RBP22.32■■□□□ 1.16
SPIN3-244ENST00000640728 YWHAHQ04917 246 aaPredicted RBP22.32■■□□□ 1.16
SPIN3-244ENST00000640728 RAB41Q5JT25 222 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 KAZNQ674X7 775 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 NDRG1Q92597 394 aaKnown RBP22.32■■□□□ 1.16
SPIN3-244ENST00000640728 CAVIN3Q969G5 261 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 FAM114A2Q9NRY5 505 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 TET1Q8NFU7 2136 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 HHLA1C9JL84 531 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 TRAPPC3O43617 180 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 PRPSAP2O60256 369 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 HSF2BPO75031 334 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 OAZ2O95190 189 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 DESP17661 470 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 TKTL1P51854 596 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 SNX1Q13596 522 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 MAPRE1Q15691 268 aaKnown RBP22.32■■□□□ 1.16
SPIN3-244ENST00000640728 SND1Q7KZF4 910 aaKnown RBP eCLIP22.32■■□□□ 1.16
SPIN3-244ENST00000640728 DEFB128Q7Z7B8 93 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 NPAS4Q8IUM7 802 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 SIX6OS1Q8N1H7 587 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 KCTD6Q8NC69 237 aa22.32■■□□□ 1.16
SPIN3-244ENST00000640728 NGRNQ9NPE2 291 aaKnown RBP22.32■■□□□ 1.16
SPIN3-244ENST00000640728 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.32■■□□□ 1.16
SPIN3-244ENST00000640728 NRP1O14786 923 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 TADA2AO75478 443 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 ENDOD1O94919 500 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 FBXO21O94952 628 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 TFE3P19532 575 aaPredicted RBP22.31■■□□□ 1.16
SPIN3-244ENST00000640728 TNNT3P45378 269 aaPredicted RBP22.31■■□□□ 1.16
SPIN3-244ENST00000640728 RABGGTBP53611 331 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 HDAC4P56524 1084 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 TSPY1Q01534 308 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 NNTQ13423 1086 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 BOLA3Q53S33 107 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 ANKLE1Q8NAG6 615 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 RHOBTB2Q9BYZ6 727 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 ATP11BQ9Y2G3 1177 aa22.31■■□□□ 1.16
SPIN3-244ENST00000640728 ECEL1O95672 775 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 FAM153BP0C7A2 387 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 HSPA8P11142 646 aaKnown RBP22.3■■□□□ 1.16
SPIN3-244ENST00000640728 MATKP42679 507 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 YWHAZP63104 245 aaKnown RBP22.3■■□□□ 1.16
SPIN3-244ENST00000640728 FAM153CQ494X1 144 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 HSPH1Q92598 858 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 ADAM33Q9BZ11 813 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 DPH5Q9H2P9 285 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 FAM153AQ9UHL3 310 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 FEZ2Q9UHY8 353 aaPredicted RBP22.3■■□□□ 1.16
SPIN3-244ENST00000640728 TSC2P49815 1807 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 ALDH2P05091 517 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 CD48P09326 243 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 BDNFP23560 247 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 ARSEP51690 589 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 C1QTNF8P60827 252 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 GPRIN1Q7Z2K8 1008 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 DEFB106AQ8N104 65 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 ATL2Q8NHH9 583 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 TEKT4Q8WW24 435 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 TBCBQ99426 244 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 ULBP1Q9BZM6 244 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 TRIM31Q9BZY9 425 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 CNGB3Q9NQW8 809 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 TMEM39AQ9NV64 488 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 OGFRQ9NZT2 677 aa22.3■■□□□ 1.16
SPIN3-244ENST00000640728 TTC3P53804 2025 aa22.29■■□□□ 1.16
SPIN3-244ENST00000640728 SYN3O14994 580 aa22.29■■□□□ 1.16
SPIN3-244ENST00000640728 DAB1O75553 588 aa22.29■■□□□ 1.16
SPIN3-244ENST00000640728 HLTFQ14527 1009 aaKnown RBP eCLIP22.29■■□□□ 1.16
SPIN3-244ENST00000640728 SCYL2Q6P3W7 929 aa22.29■■□□□ 1.16
SPIN3-244ENST00000640728 FAM149B1Q96BN6 582 aa22.29■■□□□ 1.16
SPIN3-244ENST00000640728 VWCEQ96DN2 955 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms