RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 FAM167BQ9BTA0 163 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 PRDM5Q9NQX1 630 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-223ENST00000640640 PECAM1P16284 738 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-223ENST00000640640 CYP2F1P24903 491 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 AARSP49588 968 aaKnown RBP eCLIP18.21■□□□□ 0.51
SCARB2-223ENST00000640640 CAPSQ13938 189 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 ANGPTL8Q6UXH0 198 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 SLC26A11Q86WA9 606 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 EIF1ADQ8N9N8 165 aaKnown RBP18.21■□□□□ 0.51
SCARB2-223ENST00000640640 AFF4Q9UHB7 1163 aaKnown RBP18.21■□□□□ 0.51
SCARB2-223ENST00000640640 RNF103-CHMP3A0A140T963 221 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 BTNL10A8MVZ5 291 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 CYBBP04839 570 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 RFC1P35251 1148 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-223ENST00000640640 TRIML2Q8N7C3 387 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 PIDD1Q9HB75 910 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 DDX43Q9NXZ2 648 aaKnown RBP18.21■□□□□ 0.51
SCARB2-223ENST00000640640 TIMM13Q9Y5L4 95 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-223ENST00000640640 CDY2AQ9Y6F7 541 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 CDY1Q9Y6F8 540 aa18.21■□□□□ 0.51
SCARB2-223ENST00000640640 KLHL2O95198 593 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 KCNA2P16389 499 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 ACAT1P24752 427 aaKnown RBP18.21■□□□□ 0.5
SCARB2-223ENST00000640640 MIPP30301 263 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 POLE2P56282 527 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 FMO1Q01740 532 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 ACVR2BQ13705 512 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 TEDDM1Q5T9Z0 273 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 TLK2Q86UE8 772 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 HASPINQ8TF76 798 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 RMDN2Q96LZ7 410 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 MAGEB18Q96M61 343 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 MUC3BQ9H195 1237 aa18.21■□□□□ 0.5
SCARB2-223ENST00000640640 HARS2P49590 506 aaKnown RBP18.2■□□□□ 0.5
SCARB2-223ENST00000640640 NCKAP1LP55160 1127 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 TWF1Q12792 350 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 ARHGAP18Q8N392 663 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 SYT15Q9BQS2 421 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 THTPAQ9BU02 230 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 CASTOR2A6NHX0 329 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 DNAJC6O75061 913 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 MAFO75444 373 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-223ENST00000640640 RTP1P59025 263 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 PPIL2Q13356 520 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 TDRD10Q5VZ19 366 aaKnown RBP18.2■□□□□ 0.5
SCARB2-223ENST00000640640 TAF2Q6P1X5 1199 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 KIRREL3Q8IZU9 778 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 ATP6V0D2Q8N8Y2 350 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 IGF2BP3O00425 579 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCARB2-223ENST00000640640 RPLP2P05387 115 aaKnown RBP18.2■□□□□ 0.5
SCARB2-223ENST00000640640 ERMARDQ5T6L9 678 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 KATNAL2Q8IYT4 538 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 TRPM4Q8TD43 1214 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 APOL2Q9BQE5 337 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 LRRC40Q9H9A6 602 aa18.2■□□□□ 0.5
SCARB2-223ENST00000640640 LOC100653049A0A140TA62 436 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 KRT34O76011 436 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 JCHAINP01591 159 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 PYGBP11216 843 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 HADHAP40939 763 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 YWHAZP63104 245 aaKnown RBP18.19■□□□□ 0.5
SCARB2-223ENST00000640640 MTBPQ96DY7 904 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 FAM8A1Q9UBU6 413 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 FAF1Q9UNN5 650 aaPredicted RBP18.19■□□□□ 0.5
SCARB2-223ENST00000640640 ANP32DO95626 131 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 OR5B17Q8NGF7 314 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 KLRG1Q96E93 195 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 PARP4Q9UKK3 1724 aaKnown RBP18.19■□□□□ 0.5
SCARB2-223ENST00000640640 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
SCARB2-223ENST00000640640 E5RJQ4 531 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 ENO3P13929 434 aaPredicted RBP18.19■□□□□ 0.5
SCARB2-223ENST00000640640 ADIGQ0VDE8 80 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 PTK6Q13882 451 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 IQSEC1Q6DN90 963 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 PCSK9Q8NBP7 692 aaKnown RBP18.19■□□□□ 0.5
SCARB2-223ENST00000640640 TNFSF13BQ9Y275 285 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 PCDHB7Q9Y5E2 793 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 GLRA3O75311 464 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 ZDHHC17Q8IUH5 632 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 C12orf56Q8IXR9 622 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 SNX19Q92543 992 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 COLEC11Q9BWP8 271 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 SLC40A1Q9NP59 571 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 OLA1Q9NTK5 396 aaKnown RBP18.19■□□□□ 0.5
SCARB2-223ENST00000640640 PLIN4Q96Q06 1357 aa18.19■□□□□ 0.5
SCARB2-223ENST00000640640 MROH7Q68CQ1 1323 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 KPNA6O60684 536 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 GEMP55040 296 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 USP50Q70EL3 339 aaPredicted RBP18.18■□□□□ 0.5
SCARB2-223ENST00000640640 NLRP9Q7RTR0 991 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 ZC3H15Q8WU90 426 aaKnown RBP18.18■□□□□ 0.5
SCARB2-223ENST00000640640 CMTM5Q96DZ9 223 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 SGF29Q96ES7 293 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 HSD3B7Q9H2F3 369 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 AAR2Q9Y312 384 aaKnown RBP18.18■□□□□ 0.5
SCARB2-223ENST00000640640 CYP1A2P05177 515 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 ELK3P41970 407 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 MARCKSL1P49006 195 aa18.18■□□□□ 0.5
SCARB2-223ENST00000640640 CLK2P49760 499 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms