RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 NMD3Q96D46 503 aaKnown RBP5.87□□□□□ -1.47
CCDC7-216ENST00000640058 BHMT2Q9H2M3 363 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 TFCP2L1Q9NZI6 479 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 COL20A1Q9P218 1284 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 PAXBP1Q9Y5B6 917 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 SHROOM4Q9ULL8 1493 aa5.87□□□□□ -1.47
CCDC7-216ENST00000640058 ISM1B1AKI9 464 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 ADAMTS3O15072 1205 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 CD3EAPO15446 510 aaKnown RBP5.86□□□□□ -1.47
CCDC7-216ENST00000640058 FRS3O43559 492 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 RRP9O43818 475 aaKnown RBP5.86□□□□□ -1.47
CCDC7-216ENST00000640058 GCATO75600 419 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 PIAS2O75928 621 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 FGAP02671 866 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 CYP2A6P11509 494 aaPredicted RBP5.86□□□□□ -1.47
CCDC7-216ENST00000640058 MYCLP12524 364 aaPredicted RBP5.86□□□□□ -1.47
CCDC7-216ENST00000640058 SFPQP23246 707 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCDC7-216ENST00000640058 EPHA3P29320 983 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 UQCRC1P31930 480 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 FAM187BQ17R55 369 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 AWAT1Q58HT5 328 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 MORN5Q5VZ52 161 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 MTHFD1LQ6UB35 978 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 BCDIN3DQ7Z5W3 292 aaKnown RBP5.86□□□□□ -1.47
CCDC7-216ENST00000640058 SESTD1Q86VW0 696 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 VN1R3Q9BXE9 311 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 ZNF287Q9HBT7 754 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 XPNPEP3Q9NQH7 507 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 ASIC5Q9NY37 505 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 MID2Q9UJV3 735 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 ITGB1BP2Q9UKP3 347 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 BTBD3Q9Y2F9 522 aa5.86□□□□□ -1.47
CCDC7-216ENST00000640058 FRMPD2Q68DX3 1309 aaPredicted RBP5.85□□□□□ -1.47
CCDC7-216ENST00000640058 WDR17Q8IZU2 1322 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 TCRBV5S1A1TA0A578 114 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 UBE2Q2LH0YL09 131 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 TPP1O14773 563 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 USP1O94782 785 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 COPB1P53618 953 aaKnown RBP5.85□□□□□ -1.47
CCDC7-216ENST00000640058 LMAN2Q12907 356 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 ARHGEF7Q14155 803 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 GALNT16Q8N428 558 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 DENND1AQ8TEH3 1009 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 RSPRY1Q96DX4 576 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 EFHD1Q9BUP0 239 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 TRIM5Q9C035 493 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 LRRC27Q9C0I9 530 aa5.85□□□□□ -1.47
CCDC7-216ENST00000640058 SETD1BQ9UPS6 1966 aaKnown RBP5.84□□□□□ -1.47
CCDC7-216ENST00000640058 FNDC1Q4ZHG4 1894 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-216ENST00000640058 AGPSO00116 658 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 CCP110O43303 1012 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 MGEA5O60502 916 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 MYF5P13349 255 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 IL1R1P14778 569 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 CREB1P16220 341 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 ACVR2AP27037 513 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 PEX2P28328 305 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 SLC29A2Q14542 456 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 POLD3Q15054 466 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-216ENST00000640058 DARS2Q6PI48 645 aaKnown RBP5.84□□□□□ -1.47
CCDC7-216ENST00000640058 PTCHD4Q6ZW05 846 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 C14orf80Q86SX3 495 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 SFTPA1Q8IWL2 248 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 C11orf44Q8N8P7 122 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 APIPQ96GX9 242 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 CCDC17Q96LX7 622 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 PRSS22Q9GZN4 317 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 SPRTNQ9H040 489 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-216ENST00000640058 PCDHGB6Q9Y5F9 930 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 FER1L4A9Z1Z3 1794 aa5.84□□□□□ -1.47
CCDC7-216ENST00000640058 ZNF521Q96K83 1311 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 EXOC5O00471 708 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 SPRY2O43597 315 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 CHRM5P08912 532 aaPredicted RBP5.83□□□□□ -1.48
CCDC7-216ENST00000640058 TXNP10599 105 aaKnown RBP5.83□□□□□ -1.48
CCDC7-216ENST00000640058 YY1P25490 414 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 NTSR1P30989 418 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 MMP13P45452 471 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 DIO1P49895 249 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 CPT1AP50416 773 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 PGDP52209 483 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 TIRAPP58753 221 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 ZNF268Q14587 947 aaPredicted RBP5.83□□□□□ -1.48
CCDC7-216ENST00000640058 KCNAB1Q14722 419 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 NPY5RQ15761 445 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 ZNF750Q32MQ0 723 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 C11orf87Q6NUJ2 197 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 UNC13DQ70J99 1090 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 RAB11FIP4Q86YS3 637 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 CTHRC1Q96CG8 243 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 NAF1Q96HR8 494 aaKnown RBP5.83□□□□□ -1.48
CCDC7-216ENST00000640058 CHST8Q9H2A9 424 aa5.83□□□□□ -1.48
CCDC7-216ENST00000640058 TMEM232C9JQI7 657 aa5.82□□□□□ -1.48
CCDC7-216ENST00000640058 GOLIM4O00461 696 aa5.82□□□□□ -1.48
CCDC7-216ENST00000640058 ZBED1O96006 694 aa5.82□□□□□ -1.48
CCDC7-216ENST00000640058 APEHP13798 732 aaKnown RBP5.82□□□□□ -1.48
CCDC7-216ENST00000640058 TPH1P17752 444 aa5.82□□□□□ -1.48
CCDC7-216ENST00000640058 CARSP49589 748 aaKnown RBP5.82□□□□□ -1.48
CCDC7-216ENST00000640058 TIAL1Q01085 375 aaKnown RBP eCLIP5.82□□□□□ -1.48
CCDC7-216ENST00000640058 SRGAP1Q7Z6B7 1085 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms