RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CEP72Q9P209 647 aa3.84□□□□□ -1.8
CCDC7-213ENST00000639290 ZNF532Q9HCE3 1301 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 PLD2O14939 933 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 ADAM12O43184 909 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 ADSLP30566 484 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 NTSR1P30989 418 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 EPHB3P54753 998 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 NLRP11P59045 1033 aaKnown RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 ROR1Q01973 937 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 TUSC3Q13454 348 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 FAM171A1Q5VUB5 890 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 ZNF808Q8N4W9 903 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 DEFB119Q8N690 84 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 RNF34Q969K3 372 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 SLC45A3Q96JT2 553 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 YTHDC1Q96MU7 727 aaKnown RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 UROC1Q96N76 676 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 STRADBQ9C0K7 418 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 MIR1-1HGQ9H1L0 117 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 GDF3Q9NR23 364 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 TMEM63CQ9P1W3 806 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 NEU2Q9Y3R4 380 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 CDY1Q9Y6F8 540 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 DOCK5Q9H7D0 1870 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 A0A1W2PNU3 283 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 SYN3O14994 580 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 CRLF1O75462 422 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 PRAMEF12O95522 483 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 POMCP01189 267 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 FBXO45P0C2W1 286 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 UBTFL1P0CB47 393 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 ALPPL2P10696 532 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 HOXB2P14652 356 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 LPOP22079 712 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 THBS2P35442 1172 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 CSNK1EP49674 416 aaKnown RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 PDE6CP51160 858 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 COPB1P53618 953 aaKnown RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 WNT7BP56706 349 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 ANAPC15P60006 121 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 MRPS9P82933 396 aaKnown RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 DAB2P98082 770 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 UBE3CQ15386 1083 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 CDC37Q16543 378 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 ECM1Q16610 540 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 LONRF1Q17RB8 773 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 TNNI3KQ59H18 835 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 SLC9C2Q5TAH2 1124 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 CMTM8Q8IZV2 173 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 OR4C6Q8NH72 309 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 TOE1Q96GM8 510 aaKnown RBP3.83□□□□□ -1.8
CCDC7-213ENST00000639290 AGAP3Q96P47 875 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 LY9Q9HBG7 655 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 CYP4F11Q9HBI6 524 aa3.83□□□□□ -1.8
CCDC7-213ENST00000639290 A0A1W2PRU2 124 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ARL5CA6NH57 179 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 OTOL1A6NHN0 477 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 BTBD18B2RXH4 712 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 GCOM1H8Y6P7 765 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 SORBS3O60504 671 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 PRMT3O60678 531 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 APPP05067 770 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 POLR2MP0CAP2 368 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ARSAP15289 507 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 GRM5P41594 1212 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 GUCA2AQ02747 115 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 TWF1Q12792 350 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 MRPL49Q13405 166 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 RRP12Q5JTH9 1297 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 PAPD7Q5XG87 772 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 EXOC8Q8IYI6 725 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ST6GALNAC3Q8NDV1 305 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 IPO4Q8TEX9 1081 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 PSMG2Q969U7 264 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 RELTQ969Z4 430 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 DUSP9Q99956 384 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 AMBRA1Q9C0C7 1298 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 PIF1Q9H611 641 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ZSWIM4Q9H7M6 989 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 CYP4F12Q9HCS2 524 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 JPH1Q9HDC5 661 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 DUS2Q9NX74 493 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 EIF2B4Q9UI10 523 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 PIN4Q9Y237 131 aaKnown RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 SCN8AQ9UQD0 1980 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 NSD1Q96L73 2696 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-213ENST00000639290 CROCCQ5TZA2 2017 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 CYP2D7A0A087X1C5 515 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 A0A1W2PQF6 199 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ANKUB1A6NFN9 424 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ZBTB42B2RXF5 422 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 TRIM38O00635 465 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 MBD4O95243 580 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 ITGB3P05106 788 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 JUNDP17535 347 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 GNAT2P19087 354 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 MAOBP27338 520 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 NUDT1P36639 197 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 SEC13P55735 322 aa3.82□□□□□ -1.8
CCDC7-213ENST00000639290 TLE4Q04727 773 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms