RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 VPS52Q8N1B4 723 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 OXNAD1Q96HP4 312 aaPredicted RBP20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 FAM167AQ96KS9 214 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 IQCGQ9H095 443 aaKnown RBP20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 C2orf40Q9H1Z8 148 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 HOXC10Q9NYD6 342 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 LOC285556D6RIA3 1793 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 COPEO14579 308 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 GAS2O43903 313 aaKnown RBP20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 SRGAP2CP0DJJ0 459 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 ESRRAP11474 423 aaPredicted RBP20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 DPEP1P16444 411 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 PROZP22891 400 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 RAP1GAPP47736 663 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 RNF149Q8NC42 400 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 CHST13Q8NET6 341 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 WRNIP1Q96S55 665 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 YIPF3Q9GZM5 350 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 ZNF180Q9UJW8 692 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 NVLO15381 856 aaKnown RBP20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 NRLP54845 237 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 CNTN2Q02246 1040 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 TSHZ1Q6ZSZ6 1077 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 TRIM42Q8IWZ5 723 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 APBB2Q92870 758 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 FAF2Q96CS3 445 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 SRPK1Q96SB4 655 aaKnown RBP20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 PAK5Q9P286 719 aa20.96■□□□□ 0.95
SYNGAP1-227ENST00000638142 SPDYE16A6NNV3 312 aaPredicted RBP20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 MYL2P10916 166 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 PTPN11Q06124 597 aaPredicted RBP20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 ZC3H18Q86VM9 953 aaKnown RBP20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 ZNF333Q96JL9 665 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 NMRK1Q9NWW6 199 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 TAS2R1Q9NYW7 299 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 HACL1Q9UJ83 578 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 KRT37O76014 449 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 NPTXRO95502 500 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 FESP07332 822 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 ZNF143P52747 638 aaPredicted RBP20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 HIRAP54198 1017 aaPredicted RBP20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 CDH6P55285 790 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 KLC1Q07866 573 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 RCN1Q15293 331 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 ACSBG2Q5FVE4 666 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 NPNTQ6UXI9 565 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 ARHGAP24Q8N264 748 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 JDP2Q8WYK2 163 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 PRR11Q96HE9 360 aaPredicted RBP20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 ADPGKQ9BRR6 497 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 PTPRHQ9HD43 1115 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 TTLL3Q9Y4R7 772 aa20.95■□□□□ 0.94
SYNGAP1-227ENST00000638142 FCHO1O14526 889 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 C1QAP02745 245 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 KRT19P08727 400 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 SNRPAP09012 282 aaKnown RBP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 RARBP10826 455 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 RPS12P25398 132 aaKnown RBP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 TCF7P36402 384 aaPredicted RBP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 MMRN1Q13201 1228 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 KPNB1Q14974 876 aaKnown RBP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 LGSNQ5TDP6 509 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 RINLQ6ZS11 566 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 SEPT1Q8WYJ6 367 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 C7orf26Q96N11 449 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 PEBP4Q96S96 227 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 SH3GL3Q99963 347 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 CNPY3Q9BT09 278 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 KCNK4Q9NYG8 393 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 TRIM49D1C9J1S8 452 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 H7C0C1 242 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 I3L4J1 428 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 AHCYL1O43865 530 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 MICAL2O94851 1124 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 IL18RAPO95256 599 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 ATP5OP48047 213 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 YWHAZP63104 245 aaKnown RBP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 OCRLQ01968 901 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 FAM102AQ5T9C2 384 aaPredicted RBP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 ANGEL2Q5VTE6 544 aaKnown RBP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 EXOC8Q8IYI6 725 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 RTP4Q96DX8 246 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 RAB6BQ9NRW1 208 aa20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.94■□□□□ 0.94
SYNGAP1-227ENST00000638142 TRDMT1O14717 391 aaKnown RBP20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 CDH8P55286 799 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 ATF7IP2Q5U623 682 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 SNX30Q5VWJ9 437 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 PRPF39Q86UA1 669 aaKnown RBP20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 CFAP36Q96G28 342 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 SDCBP2Q9H190 292 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 USP29Q9HBJ7 922 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 MKS1Q9NXB0 559 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 STK32BQ9NY57 414 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 SIX4Q9UIU6 781 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 EME2A4GXA9 379 aaPredicted RBP20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 ENO4A6NNW6 628 aa20.93■□□□□ 0.94
SYNGAP1-227ENST00000638142 ACKR2O00590 384 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms