RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SMPD4Q9NXE4 827 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 CPQQ9Y646 472 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 EP300Q09472 2414 aaPredicted RBP14.61□□□□□ -0.07
PNKP-228ENST00000637325 SPAG17Q6Q759 2223 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 PRR23AA6NEV1 266 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 BEST1O76090 585 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 OAS1P00973 400 aaKnown RBP14.6□□□□□ -0.07
PNKP-228ENST00000637325 BMP6P22004 513 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 YWHAEP62258 255 aaKnown RBP14.6□□□□□ -0.07
PNKP-228ENST00000637325 CETN1Q12798 172 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 PAK1Q13153 545 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 CAMK4Q16566 473 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 TSSK4Q6SA08 328 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 ASCL5Q7RTU5 278 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.07
PNKP-228ENST00000637325 ZMIZ2Q8NF64 920 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 WHAMMQ8TF30 809 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 ATRIPQ8WXE1 791 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 TMEM176AQ96HP8 235 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 DUSP9Q99956 384 aaKnown RBP14.6□□□□□ -0.07
PNKP-228ENST00000637325 GMIPQ9P107 970 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 COQ4Q9Y3A0 265 aa14.6□□□□□ -0.07
PNKP-228ENST00000637325 OTOL1A6NHN0 477 aaPredicted RBP14.59□□□□□ -0.07
PNKP-228ENST00000637325 SLC9A3R1O14745 358 aaPredicted RBP14.59□□□□□ -0.07
PNKP-228ENST00000637325 NFATC1O95644 943 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 FGFR1OPO95684 399 aaKnown RBP14.59□□□□□ -0.07
PNKP-228ENST00000637325 GNA14O95837 355 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 CXCL12P48061 93 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 FMO5P49326 533 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 LRMPQ12912 555 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 EML3Q32P44 896 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 PPP1R26Q5T8A7 1209 aaPredicted RBP14.59□□□□□ -0.07
PNKP-228ENST00000637325 TTI2Q6NXR4 508 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 CLEC20AQ6ZU45 233 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 SYNPOQ8N3V7 929 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 SPEM1Q8N4L4 309 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 TRIML1Q8N9V2 468 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 SLC35C1Q96A29 364 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 ARID3AQ99856 593 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 DUSP16Q9BY84 665 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 LINC00597Q9H2U6 94 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 FAM124BQ9H5Z6 455 aaPredicted RBP14.59□□□□□ -0.07
PNKP-228ENST00000637325 PRMT8Q9NR22 394 aaPredicted RBP14.59□□□□□ -0.07
PNKP-228ENST00000637325 TLR8Q9NR97 1041 aaKnown RBP14.59□□□□□ -0.07
PNKP-228ENST00000637325 ZSCAN32Q9NX65 697 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 IL37Q9NZH6 218 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 KIAA1468Q9P260 1216 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 CFAP97Q9P2B7 532 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 SDK1Q7Z5N4 2213 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 USP34Q70CQ2 3546 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 MYO15AQ9UKN7 3530 aa14.59□□□□□ -0.07
PNKP-228ENST00000637325 TRDMT1O14717 391 aaKnown RBP14.58□□□□□ -0.08
PNKP-228ENST00000637325 COCHO43405 550 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 OLFM2O95897 454 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 LMNAP02545 664 aaKnown RBP14.58□□□□□ -0.08
PNKP-228ENST00000637325 ACO1P21399 889 aaKnown RBP14.58□□□□□ -0.08
PNKP-228ENST00000637325 TBXAS1P24557 533 aaPredicted RBP14.58□□□□□ -0.08
PNKP-228ENST00000637325 GJA4P35212 333 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 TUBP50607 506 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 NRLP54845 237 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 SLC8A3P57103 927 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 CUL2Q13617 745 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 SNX30Q5VWJ9 437 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 FOXR2Q6PJQ5 311 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 MAMSTRQ6ZN01 415 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 NT5C1BQ96P26 610 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 P2RY13Q9BPV8 354 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 SRRTQ9BXP5 876 aaKnown RBP14.58□□□□□ -0.08
PNKP-228ENST00000637325 FAM126AQ9BYI3 521 aaPredicted RBP14.58□□□□□ -0.08
PNKP-228ENST00000637325 CCSER2Q9H7U1 834 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 SCML2Q9UQR0 700 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 SH3BP1Q9Y3L3 701 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 PCDHGA2Q9Y5H1 932 aa14.58□□□□□ -0.08
PNKP-228ENST00000637325 FAM92AA1XBS5 289 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 ZDHHC11BP0C7U3 371 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 CCDC192P0DO97 292 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 DRD1P21728 446 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 GALK1P51570 392 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 RAD23BP54727 409 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 ZXDBP98169 803 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 SATB1Q01826 763 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 CCINQ13939 588 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 TMEM196Q5HYL7 178 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 FSTL4Q6MZW2 842 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 Q6ZS52 159 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 GPRIN1Q7Z2K8 1008 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 CREBRFQ8IUR6 639 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 KIAA1958Q8N8K9 716 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 SLC4A11Q8NBS3 891 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 CD101Q93033 1021 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 PNPLA8Q9NP80 782 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 TBC1D14Q9P2M4 693 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 KIAA1549LQ6ZVL6 1849 aa14.57□□□□□ -0.08
PNKP-228ENST00000637325 HHLA1C9JL84 531 aa14.56□□□□□ -0.08
PNKP-228ENST00000637325 SCAMP3O14828 347 aaKnown RBP14.56□□□□□ -0.08
PNKP-228ENST00000637325 CYP26A1O43174 497 aa14.56□□□□□ -0.08
PNKP-228ENST00000637325 TLR5O60602 858 aa14.56□□□□□ -0.08
PNKP-228ENST00000637325 EGFP01133 1207 aa14.56□□□□□ -0.08
PNKP-228ENST00000637325 CD19P15391 556 aa14.56□□□□□ -0.08
PNKP-228ENST00000637325 GAS6Q14393 721 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms