RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 INTS4Q96HW7 963 aaKnown RBP19.38■□□□□ 0.69
CTSD-209ENST00000637158 DUSP9Q99956 384 aaKnown RBP19.38■□□□□ 0.69
CTSD-209ENST00000637158 SLC32A1Q9H598 525 aa19.38■□□□□ 0.69
CTSD-209ENST00000637158 COMMD8Q9NX08 183 aa19.38■□□□□ 0.69
CTSD-209ENST00000637158 CIZ1Q9ULV3 898 aaPredicted RBP19.38■□□□□ 0.69
CTSD-209ENST00000637158 SGK1O00141 431 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 GIPC1O14908 333 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 HOXD12P35452 270 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 HOXD13P35453 343 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 KIR2DL1P43626 348 aaPredicted RBP19.37■□□□□ 0.69
CTSD-209ENST00000637158 TUBP50607 506 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 ASIC1P78348 528 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 CYP24A1Q07973 514 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 IFRD2Q12894 506 aaPredicted RBP19.37■□□□□ 0.69
CTSD-209ENST00000637158 TRIM61Q5EBN2 209 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 FAM26FQ5R3K3 315 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 HECTD3Q5T447 861 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 SNX30Q5VWJ9 437 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 UNQ6494/PRO21346Q6UXR6 183 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 HPS3Q969F9 1004 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 FBXO32Q969P5 355 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 ZNF518BQ9C0D4 1074 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 SH3BP1Q9Y3L3 701 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 NUP205Q92621 2012 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 THADAQ6YHU6 1953 aa19.37■□□□□ 0.69
CTSD-209ENST00000637158 PTPRDP23468 1912 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 TBC1D3BA6NDS4 549 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 TGFB1I1O43294 461 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 PPP6R2O75170 966 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 AP3M2P53677 418 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 FOXC1Q12948 553 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 E2F4Q16254 413 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 LY6G5CQ5SRR4 150 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 PGBD3Q8N328 593 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 LINC00301Q8NCQ3 95 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 CEP76Q8TAP6 659 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 TNIP3Q96KP6 325 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 B3GNT5Q9BYG0 378 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 DPEP3Q9H4B8 488 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 MAGEF1Q9HAY2 307 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 DEC1Q9P2X7 70 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 NXF1Q9UBU9 619 aaKnown RBP19.36■□□□□ 0.69
CTSD-209ENST00000637158 MTMR6Q9Y217 621 aa19.36■□□□□ 0.69
CTSD-209ENST00000637158 TMEM8BA6NDV4 472 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 PATE3B3GLJ2 98 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 SPTLC2O15270 562 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 ZBTB24O43167 697 aaPredicted RBP19.35■□□□□ 0.69
CTSD-209ENST00000637158 AP5Z1O43299 807 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 COCHO43405 550 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 PHACTR2O75167 634 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 CYP2J2P51589 502 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 CACNA2D1P54289 1103 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 UAP1L1Q3KQV9 507 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 LYSMD4Q5XG99 296 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 SLC23A3Q6PIS1 610 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 RABEPKQ7Z6M1 372 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 C12orf40Q86WS4 652 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 KDF1Q8NAX2 398 aaPredicted RBP19.35■□□□□ 0.69
CTSD-209ENST00000637158 RLN3Q8WXF3 142 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 C7orf25Q9BPX7 421 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 VRTNQ9H8Y1 702 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 CHORDC1Q9UHD1 332 aaPredicted RBP19.35■□□□□ 0.69
CTSD-209ENST00000637158 NME7Q9Y5B8 376 aa19.35■□□□□ 0.69
CTSD-209ENST00000637158 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 TCRBV21S2A2A0A5A6 115 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 CLIC2O15247 247 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 HOXC11O43248 304 aaPredicted RBP19.34■□□□□ 0.69
CTSD-209ENST00000637158 HNRNPLP14866 589 aaKnown RBP eCLIP19.34■□□□□ 0.69
CTSD-209ENST00000637158 MYL6P60660 151 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 MAP7D1Q3KQU3 841 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 EMC10Q5UCC4 262 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 SLC36A4Q6YBV0 504 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 UNC13DQ70J99 1090 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 C12orf56Q8IXR9 622 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 TMEFF1Q8IYR6 380 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 GOLGA5Q8TBA6 731 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 HMGB4Q8WW32 186 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 DHX58Q96C10 678 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
CTSD-209ENST00000637158 MED10Q9BTT4 135 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 ADAM33Q9BZ11 813 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 NACA2Q9H009 215 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 DMAP1Q9NPF5 467 aaPredicted RBP19.34■□□□□ 0.69
CTSD-209ENST00000637158 IL37Q9NZH6 218 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 ZZEF1O43149 2961 aa19.34■□□□□ 0.69
CTSD-209ENST00000637158 ANTXRLA6NF34 631 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 C1QTNF9BB2RNN3 333 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 CLDN5O00501 218 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 SCAMP3O14828 347 aaKnown RBP19.33■□□□□ 0.68
CTSD-209ENST00000637158 STX6O43752 255 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 ADAM23O75077 832 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 C1QTNF9P0C862 333 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 CHRM1P11229 460 aaPredicted RBP19.33■□□□□ 0.68
CTSD-209ENST00000637158 TRIM21P19474 475 aaKnown RBP19.33■□□□□ 0.68
CTSD-209ENST00000637158 ATXN3P54252 364 aaPredicted RBP19.33■□□□□ 0.68
CTSD-209ENST00000637158 KDSRQ06136 332 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 ETFBKMTQ8IXQ9 262 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 PHTF2Q8N3S3 785 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 ZNF513Q8N8E2 541 aaPredicted RBP19.33■□□□□ 0.68
CTSD-209ENST00000637158 SCFD1Q8WVM8 642 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms