RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 TTC9BQ8N6N2 239 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 SP7Q8TDD2 431 aaPredicted RBP22.1■■□□□ 1.13
CLN8-213ENST00000637156 CNPY3Q9BT09 278 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 RAB6CQ9H0N0 254 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 RNF14Q9UBS8 474 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 SLC27A5Q9Y2P5 690 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 LAMA3Q16787 3333 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 MTMR11A4FU01 709 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 YJEFN3A6XGL0 299 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 E7ENQ6 273 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 TLL1O43897 1013 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 FBXO21O94952 628 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 ZBED1O96006 694 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 OR1D2P34982 312 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 SSR1P43307 286 aaKnown RBP22.09■■□□□ 1.13
CLN8-213ENST00000637156 RWDD2BP57060 319 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 DAOAP59103 153 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 YWHAZP63104 245 aaKnown RBP22.09■■□□□ 1.13
CLN8-213ENST00000637156 ACAP1Q15027 740 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 HFE2Q6ZVN8 426 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 BHLHA9Q7RTU4 235 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 SCN4BQ8IWT1 228 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 VPS52Q8N1B4 723 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 MNS1Q8NEH6 495 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 WDR27A2RRH5 827 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 FGF18O76093 207 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 FYNP06241 537 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 PPM1AP35813 382 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 MAGEA11P43364 429 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 GPR15P49685 360 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 SMARCB1Q12824 385 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 ACTRT1Q8TDG2 376 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 C11orf84Q9BUA3 381 aaPredicted RBP22.09■■□□□ 1.13
CLN8-213ENST00000637156 ADAM33Q9BZ11 813 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 ASNSD1Q9NWL6 643 aa22.09■■□□□ 1.13
CLN8-213ENST00000637156 NLRC5Q86WI3 1866 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 TFE3P19532 575 aaPredicted RBP22.08■■□□□ 1.13
CLN8-213ENST00000637156 PAFAH1B1P43034 410 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 GLUD2P49448 558 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 ATP11AP98196 1134 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 ROR1Q01973 937 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 C9orf50Q5SZB4 431 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 CCDC181Q5TID7 509 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 SDHAF4Q5VUM1 108 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 DEFB106AQ8N104 65 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 FAM149B1Q96BN6 582 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 C8orf48Q96LL4 319 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 DDX23Q9BUQ8 820 aaKnown RBP22.08■■□□□ 1.13
CLN8-213ENST00000637156 HERC2P3Q9BVR0 1158 aa22.08■■□□□ 1.13
CLN8-213ENST00000637156 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.08■■□□□ 1.13
CLN8-213ENST00000637156 CTAGE15A4D2H0 777 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 DPYSL4O14531 572 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 PSTPIP1O43586 416 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 HSF2BPO75031 334 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 RNF8O76064 485 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 CTAGE8P0CG41 777 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 IL1R2P27930 398 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 MIPP30301 263 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 SDC4P31431 198 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 SLC5A3P53794 718 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 KRT17Q04695 432 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 DUSP4Q13115 394 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 NAA30Q147X3 362 aaPredicted RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 LRRC38Q5VT99 294 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 ZNF572Q7Z3I7 529 aaPredicted RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 CTAGE6Q86UF2 777 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 CTAGE4Q8IX94 777 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 KLHL23Q8NBE8 558 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 SPPL2BQ8TCT7 592 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 RNPC3Q96LT9 517 aaKnown RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLN8-213ENST00000637156 TTC7AQ9ULT0 858 aaPredicted RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 CTIFO43310 598 aaKnown RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 SOAT2O75908 522 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 GLI1P08151 1106 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 GTF2F1P35269 517 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLN8-213ENST00000637156 MATKP42679 507 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 SLC25A11Q02978 314 aaKnown RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 CKAP4Q07065 602 aaKnown RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 CDO1Q16878 200 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 SYPL2Q5VXT5 272 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 SCML4Q8N228 414 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 SPATA4Q8NEY3 305 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 AUTS2Q8WXX7 1259 aa22.07■■□□□ 1.12
CLN8-213ENST00000637156 CENPIQ92674 756 aaPredicted RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 MTIF3Q9H2K0 278 aaKnown RBP22.07■■□□□ 1.12
CLN8-213ENST00000637156 TRIM66O15016 1216 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 LILRB3O75022 631 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 TADA3O75528 432 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 HAPLN1P10915 354 aaPredicted RBP22.06■■□□□ 1.12
CLN8-213ENST00000637156 PCK1P35558 622 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 PTPN9P43378 593 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 STKLD1Q8NE28 680 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 ZNF461Q8TAF7 563 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 C2orf15Q8WU43 125 aaKnown RBP22.06■■□□□ 1.12
CLN8-213ENST00000637156 POPDC2Q9HBU9 364 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 CALCOCO1Q9P1Z2 691 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.06■■□□□ 1.12
CLN8-213ENST00000637156 PCSK1NQ9UHG2 260 aa22.06■■□□□ 1.12
CLN8-213ENST00000637156 NAALADL1Q9UQQ1 740 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms