RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 PTPN9P43378 593 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 TAF6P49848 677 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 PDE4CQ08493 712 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 TMED2Q15363 201 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 CDO1Q16878 200 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 SOWAHAQ2M3V2 549 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 TRNP1Q6NT89 227 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 CYP4V2Q6ZWL3 525 aaPredicted RBP19.34■□□□□ 0.69
CLN8-211ENST00000636934 PIGWQ7Z7B1 504 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 PDIK1LQ8N165 341 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 PYROXD1Q8WU10 500 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 MAML1Q92585 1016 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 SGSM3Q96HU1 749 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 NGRNQ9NPE2 291 aaKnown RBP19.34■□□□□ 0.69
CLN8-211ENST00000636934 TBK1Q9UHD2 729 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 HES2Q9Y543 173 aa19.34■□□□□ 0.69
CLN8-211ENST00000636934 PDCD11Q14690 1871 aaKnown RBP19.33■□□□□ 0.69
CLN8-211ENST00000636934 SCN1AP35498 2009 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 MANSC4A6NHS7 340 aaPredicted RBP19.33■□□□□ 0.68
CLN8-211ENST00000636934 RASA4BC9J798 803 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 APOL1O14791 398 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 RASA4O43374 803 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 GRAP2O75791 330 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 FSBPO95073 299 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 RGS2P41220 211 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 IFNAR2P48551 515 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 GDF10P55107 478 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 GLRA4Q5JXX5 417 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 SCYL2Q6P3W7 929 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 TAX1BP1Q86VP1 789 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 UNC45BQ8IWX7 931 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 SRRM1Q8IYB3 904 aaKnown RBP19.33■□□□□ 0.68
CLN8-211ENST00000636934 MICALL1Q8N3F8 863 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 FAM71DQ8N9W8 422 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 APPL2Q8NEU8 664 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 TNIP3Q96KP6 325 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 ZNF670Q9BS34 389 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 FRMD8Q9BZ67 464 aaPredicted RBP19.33■□□□□ 0.68
CLN8-211ENST00000636934 TRIP11Q15643 1979 aa19.33■□□□□ 0.68
CLN8-211ENST00000636934 E7ESA3 106 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 H7C0C1 242 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 PAPSS1O43252 624 aaPredicted RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 FAM163BP0C2L3 166 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 AKAP5P24588 427 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 ATP5OP48047 213 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 LIG3P49916 1009 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 SLC18A1P54219 525 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 ATP11AP98196 1134 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 RNASELQ05823 741 aaKnown RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 KLHL38Q2WGJ6 581 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 SH3PXD2AQ5TCZ1 1133 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 C4orf22Q6V702 233 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 SLC26A9Q7LBE3 791 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 CYP4X1Q8N118 509 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 ANKRD42Q8N9B4 389 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 MGARPQ8TDB4 240 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 CKAP2Q8WWK9 683 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 HSFY1Q96LI6 401 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 CXCL16Q9H2A7 254 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 PAK5Q9P286 719 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 PSMC3IPQ9P2W1 217 aaPredicted RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 SMG5Q9UPR3 1016 aaKnown RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 KPNA6O60684 536 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 HUS1O60921 280 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 TOMM70O94826 608 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 ZFXP17010 805 aaPredicted RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 STX2P32856 288 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 RPL34P49207 117 aaKnown RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 MMRN1Q13201 1228 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 TAF1CQ15572 869 aaPredicted RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 SCUBE3Q8IX30 993 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 C7orf31Q8N865 590 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 SOCS4Q8WXH5 440 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 PIWIL1Q96J94 861 aaKnown RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 KDM4CQ9H3R0 1056 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 PCDH18Q9HCL0 1135 aa19.32■□□□□ 0.68
CLN8-211ENST00000636934 XPO7Q9UIA9 1087 aaKnown RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 ZMYND8Q9ULU4 1186 aaPredicted RBP19.32■□□□□ 0.68
CLN8-211ENST00000636934 FAM47DPA6NHR8 397 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 POC1B-GALNT4F8VUJ3 575 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 TREHO43280 583 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 BCAR1P56945 870 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 SLC8A3P57103 927 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 GEMIN4P57678 1058 aaKnown RBP19.31■□□□□ 0.68
CLN8-211ENST00000636934 FASTKD3Q14CZ7 662 aaKnown RBP19.31■□□□□ 0.68
CLN8-211ENST00000636934 TTC31Q49AM3 519 aaPredicted RBP19.31■□□□□ 0.68
CLN8-211ENST00000636934 ANKRD20A8PQ5CZ79 823 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 EFHC2Q5JST6 749 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 UBXN11Q5T124 520 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 LIMS2Q7Z4I7 341 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 TRABD2AQ86V40 505 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 TOP6BLQ8N6T0 577 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 KBTBD7Q8WVZ9 684 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 MAGEB18Q96M61 343 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 PLCD4Q9BRC7 762 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 FLRT1Q9NZU1 646 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 NME7Q9Y5B8 376 aa19.31■□□□□ 0.68
CLN8-211ENST00000636934 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.31■□□□□ 0.68
CLN8-211ENST00000636934 GOLGA8MH3BSY2 632 aa19.3■□□□□ 0.68
CLN8-211ENST00000636934 CHADO15335 359 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms