RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 CYFIP2Q96F07 1278 aa9.18□□□□□ -0.94
CHRNA7-219ENST00000636709 ADI1Q9BV57 179 aa9.18□□□□□ -0.94
CHRNA7-219ENST00000636709 TMEM8AQ9HCN3 771 aa9.18□□□□□ -0.94
CHRNA7-219ENST00000636709 IARS2Q9NSE4 1012 aaKnown RBP9.18□□□□□ -0.94
CHRNA7-219ENST00000636709 EIF3LQ9Y262 564 aaKnown RBP9.18□□□□□ -0.94
CHRNA7-219ENST00000636709 TRDMT1O14717 391 aaKnown RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CCNT2O60583 730 aaKnown RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 FKTNO75072 461 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 PGK1P00558 417 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 HOXA7P31268 230 aaPredicted RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 STX3Q13277 289 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CEP78Q5JTW2 689 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CBWD3Q5JTY5 395 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CBWD5Q5RIA9 395 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 TRAPPC5Q8IUR0 188 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 DTX3LQ8TDB6 740 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SPATC1LQ9H0A9 340 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CAAP1Q9H8G2 361 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 WDR41Q9HAD4 459 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SPATA31A5Q5VU36 1347 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SPATA31A7Q8IWB4 1347 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 LINC00854A0A1B0GVQ3 168 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 H3BRB1 525 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CCNG1P51959 295 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CNGA3Q16281 694 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 TRAPPC12Q8WVT3 735 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 USP7Q93009 1102 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CALR3Q96L12 384 aaKnown RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 DEFB118Q96PH6 123 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 EPN3Q9H201 632 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 ACTR5Q9H9F9 607 aaPredicted RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 RIC8BQ9NVN3 520 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 NYAP2Q9P242 653 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 PDXKO00764 312 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 ANXA9O76027 345 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 TOMM70O94826 608 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SUPT7LO94864 414 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 FLT3P36888 993 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 HERVK_113P62684 666 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 NAPEPLDQ6IQ20 393 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 NAT16Q8N8M0 369 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 LEMD2Q8NC56 503 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 ACOX2Q99424 681 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 PRRG4Q9BZD6 226 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SH3BP4Q9P0V3 963 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SAE1Q9UBE0 346 aaPredicted RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 COQ6Q9Y2Z9 468 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 TTC26A0AVF1 554 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 PNMA6AP0CW24 399 aaPredicted RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SERPINB3P29508 390 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SPRP35270 261 aaPredicted RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 TKTL1P51854 596 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 VAC14Q08AM6 782 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 BRSK2Q8IWQ3 736 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 KRT35Q92764 455 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 PPP1R2P1Q96PQ5 205 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 IMPAD1Q9NX62 359 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SYBUQ9NX95 663 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CHGBP05060 677 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 AKR1A1P14550 325 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 GRK4P32298 578 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 ADCYAP1R1P41586 468 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 GPR1P46091 355 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 VSNL1P62760 191 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 TTC39BQ5VTQ0 682 aaPredicted RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 DDX42Q86XP3 938 aaKnown RBP eCLIP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 C9orf72Q96LT7 481 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 C1QTNF7Q9BXJ2 289 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 KANSL3Q9P2N6 904 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 QRICH2Q9H0J4 1663 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 ERI2A8K979 691 aaKnown RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 GYS1P13807 737 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 ITGALP20701 1170 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 NEK2P51955 445 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 LGI2Q8N0V4 545 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CAMKK2Q96RR4 588 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 RBM15Q96T37 977 aaKnown RBP eCLIP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 PXMP2Q9NR77 195 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 SNX6Q9UNH7 406 aa9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 CDK12Q9NYV4 1490 aaPredicted RBP9.17□□□□□ -0.94
CHRNA7-219ENST00000636709 ABCA8O94911 1581 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 CDH2P19022 906 aaPredicted RBP9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 ATP2C1P98194 919 aaPredicted RBP9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 CUL4AQ13619 759 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 LINC00523Q86TU6 105 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 JAMLQ86YT9 394 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 OR10G6Q8NH81 332 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 CXorf40AQ8TE69 158 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 SOCS4Q8WXH5 440 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 NDRG2Q9UN36 371 aaKnown RBP9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 LAMC1P11047 1609 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 ZNF682O95780 498 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 CXCL8P10145 99 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 GRK2P25098 689 aa9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 ANXA11P50995 505 aaKnown RBP9.16□□□□□ -0.94
CHRNA7-219ENST00000636709 SLC45A4Q5BKX6 768 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms