RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CBWD2Q8IUF1 395 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 OLFML3Q9NRN5 406 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 ANAPC2Q9UJX6 822 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 ANKARQ7Z5J8 1434 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 EYA4O95677 639 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 XRCC4Q13426 336 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 TRPM5Q9NZQ8 1165 aa18.43■□□□□ 0.54
CACNA1A-227ENST00000636549 WDR19Q8NEZ3 1342 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 TTC26A0AVF1 554 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 TRAF2Q12933 501 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 EFL1Q7Z2Z2 1120 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 SNRNP27Q8WVK2 155 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 GPRC5DQ9NZD1 345 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 TUBE1Q9UJT0 475 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 CCDC22O60826 627 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 HSPA9P38646 679 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 MTFR1Q15390 333 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 CACHD1Q5VU97 1274 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 NAT16Q8N8M0 369 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 WDR36Q8NI36 951 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 PHF21BQ96EK2 531 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 APEX2Q9UBZ4 518 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 USP1O94782 785 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 CCNG1P51959 295 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 CBWD3Q5JTY5 395 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 CBWD5Q5RIA9 395 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 CLEC4GQ6UXB4 293 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 DNAAF5Q86Y56 855 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 ZNF786Q8N393 782 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 C2orf73Q8N5S3 287 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 RIN2Q8WYP3 895 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 GFM2Q969S9 779 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 CLPBQ9H078 707 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 RCN1Q15293 331 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 UGT3A1Q6NUS8 523 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 TRIM72Q6ZMU5 477 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 SAPCD2Q86UD0 394 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 ANKRD13AQ8IZ07 590 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 SPG21Q9NZD8 308 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 C21orf59P57076 290 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 CGRRF1Q99675 332 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 TNFSF13BQ9Y275 285 aa18.42■□□□□ 0.54
CACNA1A-227ENST00000636549 PHF20L1A8MW92 1017 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 MEI4A8MW99 385 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 TK2O00142 265 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 PSMA3P25788 255 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 C16orf46Q6P387 395 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 COLGALT2Q8IYK4 626 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 LRRC1Q9BTT6 524 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 MSRAQ9UJ68 235 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 SOAT2O75908 522 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 ZNF23P17027 643 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 CDH2P19022 906 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 FBXO38Q6PIJ6 1188 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 HERC5Q9UII4 1024 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 PCDHGA3Q9Y5H0 932 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 GOLGA8TH3BQL2 631 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 TRIM13O60858 407 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 AP5B1Q2VPB7 878 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 RAD21L1Q9H4I0 556 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 TAF1DQ9H5J8 278 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 M0R3G1 203 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 SLC2A4P14672 509 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 NDUFV1P49821 464 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 GPN3Q9UHW5 284 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 TRBV23OR9-2A0A075B6M9 112 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 CLTBP09497 229 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 FGRP09769 529 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 SCRN3Q0VDG4 424 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 PTK6Q13882 451 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 PDK1Q15118 436 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 SCAIQ8N9R8 606 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 CBFBQ13951 182 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 NEK10Q6ZWH5 1172 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 BBS4Q96RK4 519 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 KIFC1Q9BW19 673 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 HPS5Q9UPZ3 1129 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 LYVE1Q9Y5Y7 322 aa18.41■□□□□ 0.54
CACNA1A-227ENST00000636549 GSG1L2A8MUP6 293 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 CCDC188H7C350 402 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 CSHL1Q14406 222 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 ARRDC4Q8NCT1 418 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 ADM5C9JUS6 153 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 FGD3Q5JSP0 725 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 C16orf89Q6UX73 402 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 EXOC2Q96KP1 924 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 PDHXO00330 501 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 PSMC6P62333 389 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 PHACTR1Q9C0D0 580 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 RAPSNQ13702 412 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 NEK7Q8TDX7 302 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 FIG4Q92562 907 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 EMID1Q96A84 441 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 STAMBPL1Q96FJ0 436 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 S100A13Q99584 98 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 NLNQ9BYT8 704 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 WWP1Q9H0M0 922 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 ATL2Q8NHH9 583 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms