RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 VWA8A3KMH1 1905 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 B4GALT3O60512 393 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 GAS8O95995 478 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 ITGAVP06756 1048 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 ITIH2P19823 946 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 VCPP55072 806 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 FAM193AP78312 1265 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 TUSC3Q13454 348 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 MTMR3Q13615 1198 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 VSIG1Q86XK7 387 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 ALLCQ8N6M5 410 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 ZMIZ2Q8NF64 920 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 TEKT4Q8WW24 435 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 NT5C3BQ969T7 300 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 PKMYT1Q99640 499 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 DDX23Q9BUQ8 820 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 VPS18Q9P253 973 aa13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 TIMM13Q9Y5L4 95 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-219ENST00000635917 MKI67P46013 3256 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 MYBPHLA2RUH7 354 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 MDM4O15151 490 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 OPA1O60313 960 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 CST8O60676 142 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 EOMESO95936 686 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 PYGBP11216 843 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 SDC4P31431 198 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 ATP11AP98196 1134 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 DSC1Q08554 894 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 DPYSL3Q14195 570 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 MDH1BQ5I0G3 518 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 FAM171BQ6P995 826 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 FAM172AQ8WUF8 416 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 SNF8Q96H20 258 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 PCED1BQ96HM7 432 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 TBCBQ99426 244 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 SYT15Q9BQS2 421 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 DNAI2Q9GZS0 605 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 ADAM7Q9H2U9 754 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 SAE1Q9UBE0 346 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 CDH9Q9ULB4 789 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
CACNA1A-219ENST00000635917 HHLA1C9JL84 531 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ITGB1P05556 798 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 NUDT17P0C025 328 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 LCP1P13796 627 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 PAX3P23760 479 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 CACNA2D1P54289 1103 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 OTUD4Q01804 1114 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 LMNB2Q03252 620 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 TRIP13Q15645 432 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 CDO1Q16878 200 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 RAB41Q5JT25 222 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 CLLU1OSQ5K130 101 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ZFYVE27Q5T4F4 411 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 UBAP2Q5T6F2 1119 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 OTUD1Q5VV17 481 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 SLC24A5Q71RS6 500 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 FAM126BQ8IXS8 530 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 CCDC89Q8N998 374 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ZNF784Q8NCA9 323 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 MYCBPAPQ8TBZ2 947 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ACTL9Q8TC94 416 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 HSPH1Q92598 858 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 UROC1Q96N76 676 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 SMOQ99835 787 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 FRMD8P1Q9BZ68 369 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 FAM204AQ9H8W3 233 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 LRRC4CQ9HCJ2 640 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 CSNK1G1Q9HCP0 422 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ASIC3Q9UHC3 531 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ATP8A1Q9Y2Q0 1164 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ZNF487B1APH4 448 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 GOLGA8KD6RF30 607 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 F8W810 466 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 PRPSAP2O60256 369 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 B3GAT3O94766 335 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 APOC2P02655 101 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 RARGP13631 454 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 BRCC3P46736 316 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 MRPS5P82675 430 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ZNF844Q08AG5 666 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 ADIGQ0VDE8 80 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 MMRN1Q13201 1228 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 CA9Q16790 459 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 EFHC1Q5JVL4 640 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 DSTYKQ6XUX3 929 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 FAM35AQ86V20 835 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 KCTD6Q8NC69 237 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
CACNA1A-219ENST00000635917 OR2W6PQ8NHA6 318 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms