RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 NOVP48745 357 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 ADARP55265 1226 aaKnown RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 TCHHL1Q5QJ38 904 aaPredicted RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 PLEKHA7Q6IQ23 1121 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 SWSAP1Q6NVH7 229 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 EME1Q96AY2 570 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 COQ4Q9Y3A0 265 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 TCRBV9S1A1TA0A576 114 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 HNRNPRO43390 633 aaKnown RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 GLRA3O75311 464 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 TPP2P29144 1249 aaPredicted RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 PPIDQ08752 370 aaKnown RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 DPYSL3Q14195 570 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 TKFCQ3LXA3 575 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 FASTKD1Q53R41 847 aaKnown RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 ZNF667Q5HYK9 610 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 FAM102AQ5T9C2 384 aaPredicted RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 CDKL3Q8IVW4 592 aaPredicted RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 PIWIL2Q8TC59 973 aaKnown RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 CDHR1Q96JP9 859 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 C7orf26Q96N11 449 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 MRPL1Q9BYD6 325 aaKnown RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 SLC7A8Q9UHI5 535 aa8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 HERC5Q9UII4 1024 aaKnown RBP8.71□□□□□ -1.01
SMARCA2-246ENST00000635739 GPC4O75487 556 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 SLURP2P0DP57 97 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 GRK2P25098 689 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 PMLP29590 882 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 TM4SF1P30408 202 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 DUOXA2Q1HG44 320 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 FAXCQ5TGI0 409 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 ZCCHC23Q6ZST2 131 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 RAPH1Q70E73 1250 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 MON1BQ7L1V2 547 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 SLC44A1Q8WWI5 657 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 DRC3Q9H069 523 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 TRPV6Q9H1D0 765 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 EBF3Q9H4W6 596 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 MRPL40Q9NQ50 206 aaKnown RBP8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 TLK1Q9UKI8 766 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 CLRN2A0PK11 232 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 TMEM150BA6NC51 233 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 APOL1O14791 398 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 FAM58BPP0C7Q3 252 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 SRGAP2CP0DJJ0 459 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 SRGAP2BP0DMP2 458 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 ENO3P13929 434 aaPredicted RBP8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 SAT1P21673 171 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 CCND2P30279 289 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 NCKAP1LP55160 1127 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 RPL10AP62906 217 aaKnown RBP8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 WASHC5Q12768 1159 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 LPCAT4Q643R3 524 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 PDPK2PQ6A1A2 396 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 RBM44Q6ZP01 1051 aaKnown RBP8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 TRIM50Q86XT4 487 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 SPIRE2Q8WWL2 714 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 CPT1BQ92523 772 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 APPL1Q9UKG1 709 aa8.71□□□□□ -1.02
SMARCA2-246ENST00000635739 TRPM3Q9HCF6 1732 aaPredicted RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 TRDMT1O14717 391 aaKnown RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 NUDT2P50583 147 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 UBAP2LQ14157 1087 aaKnown RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 PRKD1Q15139 912 aaPredicted RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 TMCO4Q5TGY1 634 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 BBS12Q6ZW61 710 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 DAW1Q8N136 415 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 GLIS1Q8NBF1 620 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 TMEM161BQ8NDZ6 487 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 AGR3Q8TD06 166 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 MFSD14AQ96MC6 490 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 MECRQ9BV79 373 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 GRIP2Q9C0E4 1043 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 NIF3L1Q9GZT8 377 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 UPF3AQ9H1J1 476 aaKnown RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 NRBP2Q9NSY0 501 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 ADA2Q9NZK5 511 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 NUP98P52948 1817 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 CCDC88AQ3V6T2 1871 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 TMEM191CA6NGB0 347 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 THRAP10827 490 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 MCF2P10911 925 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 DSG3P32926 999 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 USP46P62068 366 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 FOLH1Q04609 750 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 KLF1Q13351 362 aaPredicted RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 FNBP1LQ5T0N5 605 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 GRAMD4Q6IC98 578 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 DENND5BQ6ZUT9 1274 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 SETD3Q86TU7 594 aaPredicted RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 ZFPM1Q8IX07 1006 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 RTKN2Q8IZC4 609 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 GATA6Q92908 595 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 SKA1Q96BD8 255 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 PTCD3Q96EY7 689 aaKnown RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 PRPF18Q99633 342 aaKnown RBP8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 SEPT10Q9P0V9 454 aa8.7□□□□□ -1.02
SMARCA2-246ENST00000635739 C15orf38-AP3S2A0A0A6YYH1 394 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms