RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PSMC2P35998 433 aaKnown RBP16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 USP4Q13107 963 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 USP39Q53GS9 565 aaKnown RBP16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 PSAPL1Q6NUJ1 521 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 FAM171BQ6P995 826 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 CCDC33Q8N5R6 958 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 OR5B17Q8NGF7 314 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 GPT2Q8TD30 523 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 FUBP3Q96I24 572 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 EDEM2Q9BV94 578 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 EBF1Q9UH73 591 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 NUP205Q92621 2012 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 HELZP42694 1942 aaKnown RBP16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 KMT2BQ9UMN6 2715 aaPredicted RBP16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 CNOT1A5YKK6 2376 aaKnown RBP16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 BICDL2A1A5D9 508 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 BCLAF3A2AJT9 711 aaKnown RBP16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 ANTXRLA6NF34 631 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 NFATC1O95644 943 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 CD44P16070 742 aaKnown RBP16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 BMP6P22004 513 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 ANXA13P27216 316 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 AP3M2P53677 418 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 ANO7Q6IWH7 933 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 INTS8Q75QN2 995 aaKnown RBP16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 DPH6Q7L8W6 267 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 SPATA18Q8TC71 538 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 PARD3BQ8TEW8 1205 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 MYLPFQ96A32 169 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 CRTAC1Q9NQ79 661 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 TRPM5Q9NZQ8 1165 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 CDH9Q9ULB4 789 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 CTNND2Q9UQB3 1225 aa16.54■□□□□ 0.24
SNRNP48-203ENST00000634363 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 LRRIQ3A6PVS8 624 aaPredicted RBP16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 K7EQS6 105 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 LEFTY2O00292 366 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 SCAMP3O14828 347 aaKnown RBP16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 PHACTR2O75167 634 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 CLSTN1O94985 981 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 MAGEA11P43364 429 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 PDE6CP51160 858 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 NOVA1P51513 510 aaKnown RBP16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 VAMP7P51809 220 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 PMS1P54277 932 aaKnown RBP16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 USP46P62068 366 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 ZXDBP98169 803 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 PAK1Q13153 545 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 BIRC3Q13489 604 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 TRPC3Q13507 836 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 ANKRD40Q6AI12 368 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 VSTM1Q6UX27 236 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 DENND5BQ6ZUT9 1274 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 TRAPPC11Q7Z392 1133 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 CCDC26Q8TAB7 109 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 TMC2Q8TDI7 906 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 USP33Q8TEY7 942 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 KBTBD7Q8WVZ9 684 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 SPATA17Q96L03 361 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 ARHGAP26Q9UNA1 814 aa16.53■□□□□ 0.24
SNRNP48-203ENST00000634363 MYOFQ9NZM1 2061 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 GIPC1O14908 333 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 KHNYNO15037 678 aaKnown RBP16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 OPRD1P41143 372 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 DHPSP49366 369 aaPredicted RBP16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 IFRD2Q12894 506 aaPredicted RBP16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 MAPRE1Q15691 268 aaKnown RBP16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 DAB2IPQ5VWQ8 1189 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 PLEKHO2Q8TD55 490 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 EEF2KMTQ96G04 330 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 PCED1BQ96HM7 432 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 RNF38Q9H0F5 515 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 SNX25Q9H3E2 840 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 SMPD4Q9NXE4 827 aa16.52■□□□□ 0.24
SNRNP48-203ENST00000634363 LNP1A1A4G5 178 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 PATE3B3GLJ2 98 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 IKBKBO14920 756 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 BCKDHBP21953 392 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 GNL1P36915 607 aaPredicted RBP16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 SLC6A11P48066 632 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 DLG4P78352 724 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 CLDN10P78369 228 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 SHC2P98077 582 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 ENPEPQ07075 957 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 MDH1BQ5I0G3 518 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 FOXR2Q6PJQ5 311 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 ADGRG2Q8IZP9 1017 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 MLKLQ8NB16 471 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 OR6B3Q8NGW1 331 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 EHD2Q9NZN4 543 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 DACH1Q9UI36 760 aa16.51■□□□□ 0.23
SNRNP48-203ENST00000634363 F8VP50 259 aa16.5■□□□□ 0.23
SNRNP48-203ENST00000634363 TRIM66O15016 1216 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms