RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 RB1P06400 928 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MCF2P10911 925 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RAG1P15918 1043 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 HLA-DPA1P20036 260 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NR1D1P20393 614 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TTKP33981 857 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 OR1G1P47890 313 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PPP3CCP48454 512 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 AFF3P51826 1226 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 COPS2P61201 443 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PRKCEQ02156 737 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SPARCL1Q14515 664 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PPP2R5EQ16537 467 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ABCB5Q2M3G0 1257 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 STXBP5Q5T5C0 1151 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 LDLRAD1Q5T700 205 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC30A10Q6XR72 485 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 KRT73Q86Y46 540 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TMTC1Q8IUR5 882 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CNGA4Q8IV77 575 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CDKL3Q8IVW4 592 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SCUBE3Q8IX30 993 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF654Q8IZM8 581 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF687Q8N1G0 1237 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC35F6Q8N357 371 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MAGEB6Q8N7X4 407 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NECAB1Q8N987 351 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TSPEARQ8WU66 669 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ASB12Q8WXK4 309 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RIN2Q8WYP3 895 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PIP5K1AQ99755 562 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TCF25Q9BQ70 676 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PAIP1Q9H074 479 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CCDC86Q9H6F5 360 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MTMR4Q9NYA4 1195 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PCDHGB6Q9Y5F9 930 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PCDHGA2Q9Y5H1 932 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SALL3Q9BXA9 1300 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 KDM6AO15550 1401 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 GMNCA6NCL1 334 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC9B1P1A6NJY1 282 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 F6X3S4 739 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 BACH1O14867 736 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PHF2O75151 1096 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ADAMTS4O75173 837 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TRIM3O75382 744 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TBX18O95935 607 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PABPC4LP0CB38 370 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 APEHP13798 732 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 TFEBP19484 476 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 NOS3P29474 1203 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SSTR3P32745 418 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 MSH2P43246 934 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 S100A12P80511 92 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ENPEPQ07075 957 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PUDPQ08623 228 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SSRP1Q08945 709 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 STK4Q13043 487 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM189A2Q15884 450 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CTC1Q2NKJ3 1217 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SGSM1Q2NKQ1 1148 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ACCSLQ4AC99 568 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ZCWPW2Q504Y3 356 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM209BQ5JX69 171 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 RTP2Q5QGT7 225 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 C1orf185Q5T7R7 199 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 NDUFAF5Q5TEU4 345 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF530Q6P9A1 599 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF227Q86WZ6 799 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CAMK1DQ8IU85 385 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 IFT20Q8IY31 132 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 FMR1NBQ8N0W7 255 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CLEC4FQ8N1N0 589 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CAMKK1Q8N5S9 505 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 NOA1Q8NC60 698 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC26A7Q8TE54 656 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CAPSLQ8WWF8 208 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 NELFBQ8WX92 580 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 KCTD13Q8WZ19 329 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ATP2A3Q93084 1043 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 CYFIP2Q96F07 1278 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 EXOC2Q96KP1 924 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ADAM19Q9H013 955 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 KLHL25Q9H0H3 589 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 STRN4Q9NRL3 753 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM105AQ9NUU6 356 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 DNAJC17Q9NVM6 304 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SIRT5Q9NXA8 310 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PAQR5Q9NXK6 330 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 NKIRAS2Q9NYR9 191 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 SELENONQ9NZV5 590 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 THEGQ9P2T0 379 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 AGO2Q9UKV8 859 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PCDHGB4Q9UN71 923 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 ARHGAP26Q9UNA1 814 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 COMMD3-BMI1R4GMX3 469 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 PLEKHG1Q9ULL1 1385 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 AKAP12Q02952 1782 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 LRP6O75581 1613 aa4.03□□□□□ -1.76
R3HDM1-220ENST00000628915 DPPA5A6NC42 116 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms