RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 ZBTB49Q6ZSB9 765 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 TCF7L2Q9NQB0 619 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 GRHL1Q9NZI5 618 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 TMEM59LQ9UK28 342 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 FNDC3AQ9Y2H6 1198 aaKnown RBP18.32■□□□□ 0.52
FARP1-242ENST00000627049 SLIT3O75094 1523 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 HUS1O60921 280 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 FESP07332 822 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 TFE3P19532 575 aaPredicted RBP18.32■□□□□ 0.52
FARP1-242ENST00000627049 TPP2P29144 1249 aaPredicted RBP18.32■□□□□ 0.52
FARP1-242ENST00000627049 SLC25A3Q00325 362 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 SEZ6Q53EL9 994 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 TMEM79Q9BSE2 394 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 TCRBV7S2A1N4TA0A589 114 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 PRPF4O43172 522 aaKnown RBP eCLIP18.32■□□□□ 0.521e-8■■■□□ 16.5
FARP1-242ENST00000627049 KCNA4P22459 653 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 RPL5P46777 297 aaKnown RBP18.32■□□□□ 0.52
FARP1-242ENST00000627049 NCKAP1LP55160 1127 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 ABCE1P61221 599 aaKnown RBP18.32■□□□□ 0.52
FARP1-242ENST00000627049 ITGA9Q13797 1035 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 C4orf19Q8IY42 314 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 COG5Q9UP83 839 aa18.32■□□□□ 0.52
FARP1-242ENST00000627049 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
FARP1-242ENST00000627049 ALOX15BO15296 676 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 TPBGLP0DKB5 382 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 SHMT1P34896 483 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 PTGIRP43119 386 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 CATSPER4Q7RTX7 472 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 ADCK1Q86TW2 530 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 ALLCQ8N6M5 410 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 STKLD1Q8NE28 680 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 KIF12Q96FN5 646 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 CGRRF1Q99675 332 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 C10orf88Q9H8K7 445 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 FOXO6A8MYZ6 492 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 DCXO43602 365 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 CREB1P16220 341 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 RPS6P62753 249 aaKnown RBP18.31■□□□□ 0.52
FARP1-242ENST00000627049 TFB1MQ8WVM0 346 aaKnown RBP18.31■□□□□ 0.52
FARP1-242ENST00000627049 CASZ1Q86V15 1759 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 ETS2P15036 469 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 RBP5P82980 135 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 BST1Q10588 318 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 CCDC33Q8N5R6 958 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 ZNF483Q8TF39 744 aaPredicted RBP18.31■□□□□ 0.52
FARP1-242ENST00000627049 WDR60Q8WVS4 1066 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 NT5C1AQ9BXI3 368 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 ZDHHC18Q9NUE0 388 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 SLC5A4Q9NY91 659 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 DAB1O75553 588 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 UPP2O95045 317 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 APOA1P02647 267 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 MXD4Q14582 209 aaPredicted RBP18.31■□□□□ 0.52
FARP1-242ENST00000627049 ULK2Q8IYT8 1036 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 ZNF555Q8NEP9 628 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 SPOCK2Q92563 424 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 USP13Q92995 863 aaPredicted RBP18.31■□□□□ 0.52
FARP1-242ENST00000627049 ACSS3Q9H6R3 686 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 CISHQ9NSE2 258 aa18.31■□□□□ 0.52
FARP1-242ENST00000627049 SNX2O60749 519 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 MMP10P09238 476 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 PTGER2P43116 358 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 DENND5BQ6ZUT9 1274 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 TAAR1Q96RJ0 339 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 IL1RL2Q9HB29 575 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 ATXN10Q9UBB4 475 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 F8VP50 259 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 JAM2P57087 298 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 TPI1P60174 286 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 CDR2LQ86X02 465 aaPredicted RBP18.3■□□□□ 0.52
FARP1-242ENST00000627049 GMCL1P1Q8NEA9 526 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 PIWIL2Q8TC59 973 aaKnown RBP18.3■□□□□ 0.52
FARP1-242ENST00000627049 ELMO2Q96JJ3 720 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 HOXC10Q9NYD6 342 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 NOD1Q9Y239 953 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 M0R3G1 203 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 ISLR2Q6UXK2 745 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 TDRD5Q8NAT2 981 aaKnown RBP18.3■□□□□ 0.52
FARP1-242ENST00000627049 RMND5BQ96G75 393 aaPredicted RBP18.3■□□□□ 0.52
FARP1-242ENST00000627049 CNPY3Q9BT09 278 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 CCDC28BQ9BUN5 200 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 ZNF408Q9H9D4 720 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 FBXO28Q9NVF7 368 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 FBXO40Q9UH90 709 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 SLCO1B7G3V0H7 640 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 ALBP02768 609 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 SPATA31C1P0DKV0 1188 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 SULT1E1P49888 294 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 NSUN2Q08J23 767 aaKnown RBP eCLIP18.3■□□□□ 0.52
FARP1-242ENST00000627049 DPYSL3Q14195 570 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 PPHLN1Q8NEY8 458 aaKnown RBP18.3■□□□□ 0.52
FARP1-242ENST00000627049 SLITRK1Q96PX8 696 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 FHDC1Q9C0D6 1143 aaPredicted RBP18.3■□□□□ 0.52
FARP1-242ENST00000627049 MTMR12Q9C0I1 747 aa18.3■□□□□ 0.52
FARP1-242ENST00000627049 SPDYE16A6NNV3 312 aaPredicted RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 TRDMT1O14717 391 aaKnown RBP18.29■□□□□ 0.52
FARP1-242ENST00000627049 SLC1A5Q15758 541 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
FARP1-242ENST00000627049 ZBTB41Q5SVQ8 909 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms