RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 LPIN1Q14693 890 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 UBAP2Q5T6F2 1119 aaKnown RBP20.58■□□□□ 0.89
TREX1-205ENST00000625293 AGBL2Q5U5Z8 902 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 WSCD1Q658N2 575 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 GLIS1Q8NBF1 620 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 BBOF1Q8ND07 529 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 CCHCR1Q8TD31 782 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 CFAP57Q96MR6 1250 aa20.58■□□□□ 0.89
TREX1-205ENST00000625293 GOLGA6L10A6NI86 522 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 RIPK2O43353 540 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 CST8O60676 142 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 CABYRO75952 493 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 SHBGP04278 402 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 ACADSBP45954 432 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 NECAB2Q7Z6G3 386 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 PRUNE1Q86TP1 453 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 FUKQ8N0W3 1084 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 TTC13Q8NBP0 860 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 KCTD6Q8NC69 237 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 HSPH1Q92598 858 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 HAUS1Q96CS2 278 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 SENP8Q96LD8 212 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 CACNG4Q9UBN1 327 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 ZNF148Q9UQR1 794 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 XPO1O14980 1071 aaKnown RBP20.57■□□□□ 0.88
TREX1-205ENST00000625293 GHRP10912 638 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 SDC4P31431 198 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 PTPN9P43378 593 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 RAB27AP51159 221 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 OTUD4Q01804 1114 aaKnown RBP20.57■□□□□ 0.88
TREX1-205ENST00000625293 ITGA7Q13683 1181 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 SLC29A2Q14542 456 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 IZUMO3Q5VZ72 239 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 DENND2CQ68D51 928 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 HIBCHQ6NVY1 386 aaPredicted RBP20.57■□□□□ 0.88
TREX1-205ENST00000625293 KDM7AQ6ZMT4 941 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 PAQR9Q6ZVX9 377 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 TRMT10CQ7L0Y3 403 aaKnown RBP20.57■□□□□ 0.88
TREX1-205ENST00000625293 ANKLE1Q8NAG6 615 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 ACTL9Q8TC94 416 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 CLEC4CQ8WTT0 213 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 TSPYL1Q9H0U9 437 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 C11orf49Q9H6J7 331 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 RSAD1Q9HA92 442 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 ANAPC5Q9UJX4 755 aa20.57■□□□□ 0.88
TREX1-205ENST00000625293 ATP2C2O75185 946 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 COL6A1P12109 1028 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 PTPN1P18031 435 aaKnown RBP20.56■□□□□ 0.88
TREX1-205ENST00000625293 VPS41P49754 854 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 SCNN1GP51170 649 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 CLCNKBP51801 687 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 CCDC142Q17RM4 750 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 KIAA0319Q5VV43 1072 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 GSTA5Q7RTV2 222 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 C3orf58Q8NDZ4 430 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 FAM172AQ8WUF8 416 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 TEKT4Q8WW24 435 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 CENPIQ92674 756 aaPredicted RBP20.56■□□□□ 0.88
TREX1-205ENST00000625293 NCAPGQ9BPX3 1015 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 TMEM109Q9BVC6 243 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 DUSP16Q9BY84 665 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 ADAM7Q9H2U9 754 aa20.56■□□□□ 0.88
TREX1-205ENST00000625293 TRMT13Q9NUP7 481 aaKnown RBP20.56■□□□□ 0.88
TREX1-205ENST00000625293 A0A0U1RQF3 1178 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 APOC4-APOC2K7ER74 178 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 DNALI1O14645 258 aaPredicted RBP20.55■□□□□ 0.88
TREX1-205ENST00000625293 PRPSAP2O60256 369 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 APOC2P02655 101 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 RPL9P32969 192 aaKnown RBP20.55■□□□□ 0.88
TREX1-205ENST00000625293 ACLYP53396 1101 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 ATN1P54259 1190 aaPredicted RBP20.55■□□□□ 0.88
TREX1-205ENST00000625293 HDAC4P56524 1084 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 DPYSL3Q14195 570 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 CDO1Q16878 200 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 BOLA3Q53S33 107 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 RNF180Q86T96 592 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 TMEM86AQ8N2M4 240 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 TBCBQ99426 244 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 CDC42EP4Q9H3Q1 356 aaKnown RBP20.55■□□□□ 0.88
TREX1-205ENST00000625293 PCDH9Q9HC56 1237 aa20.55■□□□□ 0.88
TREX1-205ENST00000625293 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.55■□□□□ 0.88
TREX1-205ENST00000625293 SAE1Q9UBE0 346 aaPredicted RBP20.55■□□□□ 0.88
TREX1-205ENST00000625293 DNM1LO00429 736 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 ZSCAN5DPP0CG00 497 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 CAPN2P17655 700 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 ACAT1P24752 427 aaKnown RBP20.54■□□□□ 0.88
TREX1-205ENST00000625293 DYNLT1P63172 113 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 ATP11AP98196 1134 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 KRT71Q3SY84 523 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 VSIG1Q86XK7 387 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 RFX6Q8HWS3 928 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 RELL1Q8IUW5 271 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 ADAM33Q9BZ11 813 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 SQORQ9Y6N5 450 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 PDE4DIPQ5VU43 2346 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 MDM4O15151 490 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 LCP1P13796 627 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 ETS1P14921 441 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 NR1D1P20393 614 aa20.54■□□□□ 0.88
TREX1-205ENST00000625293 CDH6P55285 790 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms