RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 DNAJC6O75061 913 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 C1QAP02745 245 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 PFKMP08237 780 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 PTPN4P29074 926 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 ETV4P43268 484 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 PSMC4P43686 418 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 CLCN3P51790 818 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 CDH6P55285 790 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 IRX3P78415 501 aaPredicted RBP10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 RBP5P82980 135 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 ZNF200P98182 395 aaPredicted RBP10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 MMRN1Q13201 1228 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 SEPT7Q16181 437 aaKnown RBP10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 RALGAPA2Q2PPJ7 1873 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLC10A6Q3KNW5 377 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 BOLA3Q53S33 107 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 FAM102AQ5T9C2 384 aaPredicted RBP10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 FAM91A1Q658Y4 838 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 TRNP1Q6NT89 227 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 NPNTQ6UXI9 565 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 EEPD1Q7L9B9 569 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 MCUQ8NE86 351 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 SPATA18Q8TC71 538 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 FAF2Q96CS3 445 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 MRRFQ96E11 262 aaKnown RBP10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 HPDLQ96IR7 371 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 HEXIM2Q96MH2 286 aaKnown RBP10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 TBCBQ99426 244 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 CALN1Q9BXU9 219 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 ASCC2Q9H1I8 757 aaPredicted RBP10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 IFT122Q9HBG6 1241 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 MKS1Q9NXB0 559 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 CNTN3Q9P232 1028 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 ZNF180Q9UJW8 692 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 ITGA11Q9UKX5 1188 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 CHMP2BQ9UQN3 213 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 STK38LQ9Y2H1 464 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 C2CD2Q9Y426 696 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 CSADQ9Y600 493 aa10.03□□□□□ -0.8
IGHV3-54-201ENST00000622166 TCRBV9S1A1TA0A576 114 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 H7C0C1 242 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 KLF11O14901 512 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 PRPSAP2O60256 369 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 GJB1P08034 283 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 IQCF3P0C7M6 154 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 PDGFRAP16234 1089 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 CCNFP41002 786 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 ATP5OP48047 213 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 NDST1P52848 882 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 YWHAZP63104 245 aaKnown RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 BASP1P80723 227 aaKnown RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 CDK18Q07002 472 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 FAAP100Q0VG06 881 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 PTK7Q13308 1070 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 ORC1Q13415 861 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 TMEM132DQ14C87 1099 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 CTC1Q2NKJ3 1217 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 CCDC14Q49A88 953 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 PKDCCQ504Y2 493 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 CMPK2Q5EBM0 449 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 TTC39BQ5VTQ0 682 aaPredicted RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 MAP1SQ66K74 1059 aaPredicted RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 SLC9A4Q6AI14 798 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 OR6B2Q6IFH4 312 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 FAM183BPQ6ZVS7 135 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 LONP2Q86WA8 852 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 CDR2LQ86X02 465 aaPredicted RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 MAP7D3Q8IWC1 876 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 GPC2Q8N158 579 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 PQLC3Q8N755 202 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 PLD5Q8N7P1 536 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 UBA3Q8TBC4 463 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 NSMCE1Q8WV22 266 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 N4BP2L2Q92802 583 aaPredicted RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 COPS5Q92905 334 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 LRRC39Q96DD0 335 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 THOC1Q96FV9 657 aaKnown RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 RSRC1Q96IZ7 334 aaKnown RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 SERAC1Q96JX3 654 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 MMP19Q99542 508 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 R3HDMLQ9H3Y0 253 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 PCDH18Q9HCL0 1135 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 BATF3Q9NR55 127 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 SLC17A7Q9P2U7 560 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 RBPJLQ9UBG7 517 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZFP69BQ9UJL9 534 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 HAO1Q9UJM8 370 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 MTO1Q9Y2Z2 717 aaKnown RBP10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 L3MBTL1Q9Y468 752 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 TTLL3Q9Y4R7 772 aa10.02□□□□□ -0.81
IGHV3-54-201ENST00000622166 ASB14A6NK59 587 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 KBTBD13C9JR72 458 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 APOL1O14791 398 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 LPXNO60711 386 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 PEX11AO75192 247 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 TOMM70O94826 608 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms