RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 RNF40O75150 1001 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 CD4P01730 458 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 GOT1P17174 413 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.65
VPS11-208ENST00000621676 AP3M2P53677 418 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 DUSP4Q13115 394 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 CALCOCO2Q13137 446 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 SPARCL1Q14515 664 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 FASTKD3Q14CZ7 662 aaKnown RBP11.02□□□□□ -0.65
VPS11-208ENST00000621676 LONRF1Q17RB8 773 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 KRT71Q3SY84 523 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 PLEKHA7Q6IQ23 1121 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 SLFN11Q7Z7L1 901 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 LINC01599Q8WXQ3 324 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 LGMNQ99538 433 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 BCO2Q9BYV7 579 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 WNT8AQ9H1J5 351 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 FAM204AQ9H8W3 233 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 TBC1D13Q9NVG8 400 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 ZMYND8Q9ULU4 1186 aaPredicted RBP11.02□□□□□ -0.65
VPS11-208ENST00000621676 COL1A2P08123 1366 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 IFNAR2P48551 515 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 GBE1Q04446 702 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 YWHAHQ04917 246 aaPredicted RBP11.02□□□□□ -0.65
VPS11-208ENST00000621676 SV2CQ496J9 727 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 CCDC14Q49A88 953 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 PPP1R21Q6ZMI0 780 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.65
VPS11-208ENST00000621676 TFAP2DQ7Z6R9 452 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 ECHDC2Q86YB7 292 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 HACE1Q8IYU2 909 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 MDM1Q8TC05 714 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 RSAD2Q8WXG1 361 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 FMO2Q99518 471 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 CARD9Q9H257 536 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 NENFQ9UMX5 172 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 SCINQ9Y6U3 715 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 MUC3AQ02505 3323 aa11.02□□□□□ -0.65
VPS11-208ENST00000621676 A0A0U1RQF3 1178 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 PIRO00625 290 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 HSF2BPO75031 334 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 SLC4A1P02730 911 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 FAM200BP0CF97 657 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 RBP3P10745 1247 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 IRF1P10914 325 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 GJA1P17302 382 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 GPD1P21695 349 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ZNF132P52740 706 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ITGA8P53708 1063 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 SLC29A2Q14542 456 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 BRD3Q15059 726 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 BBS9Q3SYG4 887 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 CES3Q6UWW8 571 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 UNC45BQ8IWX7 931 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 MSL3Q8N5Y2 521 aaKnown RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 CCDC89Q8N998 374 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 KLHDC9Q8NEP7 349 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ZNF560Q96MR9 790 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ZBED2Q9BTP6 218 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 APOL5Q9BWW9 433 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 NACA2Q9H009 215 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 CWC15Q9P013 229 aaKnown RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 FAM72CH0Y354 149 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 GOLGA8RI6L899 631 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ARVCFO00192 962 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ADAM12O43184 909 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 BNIP3LO60238 219 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ABCD1P33897 745 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 LRRC14Q15048 493 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 HADHQ16836 314 aaKnown RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 FAM72AQ5TYM5 149 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 FAM72DQ6L9T8 149 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 FAM72BQ86X60 149 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 C3orf20Q8ND61 904 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ATXN3LQ9H3M9 355 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 CNTN3Q9P232 1028 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 NCANO14594 1321 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 XPOTO43592 962 aaKnown RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 AP1B1Q10567 949 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 ZBTB6Q15916 424 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 CTXN3Q4LDR2 81 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 CASC4Q6P4E1 433 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 SPOCD1Q6ZMY3 1216 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 CLEC20AQ6ZU45 233 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 PAQR9Q6ZVX9 377 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 CIR1Q86X95 450 aaPredicted RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 PHF13Q86YI8 300 aaPredicted RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 MMGT1Q8N4V1 131 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 MSANTD4Q8NCY6 345 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 PPP1R10Q96QC0 940 aaKnown RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 SMOQ99835 787 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 SELENOSQ9BQE4 189 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 SNRNP25Q9BV90 132 aaKnown RBP11.01□□□□□ -0.65
VPS11-208ENST00000621676 MPP6Q9NZW5 540 aa11.01□□□□□ -0.65
VPS11-208ENST00000621676 KCNN4O15554 427 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms