RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CDH9Q9ULB4 789 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 MRPS17Q9Y2R5 130 aaKnown RBP5.56□□□□□ -1.52
SHMT1-211ENST00000618902 PPP2R2CQ9Y2T4 447 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 YIPF1Q9Y548 306 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 PCDHB5Q9Y5E4 795 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 INSL5Q9Y5Q6 135 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 FHOD1Q9Y613 1164 aa5.56□□□□□ -1.52
SHMT1-211ENST00000618902 ATP8B3O60423 1300 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 SPTBN4Q9H254 2564 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 GREB1Q4ZG55 1949 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 A0A1W2PQC6 194 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 CCDC151A5D8V7 595 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TMEM221A6NGB7 291 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 C2CD4DB7Z1M9 353 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 HHLA1C9JL84 531 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 M0R296 226 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TULP2O00295 520 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 FOXN3O00409 490 aaPredicted RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 MAN2B1O00754 1011 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TADA3O75528 432 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 RHOP08100 348 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 BRD2P25440 801 aaKnown RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 PBX1P40424 430 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 PGFP49763 221 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 USP46P62068 366 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 KRT83P78385 493 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 CBX1P83916 185 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 GCNT1Q02742 428 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 CETN1Q12798 172 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 ZNF268Q14587 947 aaPredicted RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TERF2Q15554 542 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 DDR2Q16832 855 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 SLC5A9Q2M3M2 681 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 ARHGAP15Q53QZ3 475 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 WDR44Q5JSH3 913 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 PRSS36Q5K4E3 855 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 SYT10Q6XYQ8 523 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 GPRIN1Q7Z2K8 1008 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 GRASPQ7Z6J2 395 aaPredicted RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TMEM150AQ86TG1 271 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 FAM35AQ86V20 835 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 UNC93AQ86WB7 457 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TTC30AQ86WT1 665 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 REXO1L1PQ8IX06 675 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 C17orf53Q8N3J3 647 aaPredicted RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 PPM1KQ8N3J5 372 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 ST13P5Q8NFI4 369 aaPredicted RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 OLIG1Q8TAK6 271 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 ITFG1Q8TB96 612 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 SLC2A14Q8TDB8 520 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 GIPC2Q8TF65 315 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 OVCA2Q8WZ82 227 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 SHC3Q92529 594 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 RUBCNQ92622 972 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 FGF13Q92913 245 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 IRF7Q92985 503 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 PBXIP1Q96AQ6 731 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 ASIC4Q96FT7 647 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TNIP3Q96KP6 325 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 MYRFLQ96LU7 910 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 GCNAQ96QF7 691 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 ERGIC2Q96RQ1 377 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 MYADMQ96S97 322 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 KCNK16Q96T55 309 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 SMOQ99835 787 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 LRFN3Q9BTN0 628 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 NT5C1AQ9BXI3 368 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TSPYL1Q9H0U9 437 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 KIF9Q9HAQ2 790 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 ZFP14Q9HCL3 533 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 ARFGAP3Q9NP61 516 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 PNPLA8Q9NP80 782 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 UBE2TQ9NPD8 197 aaPredicted RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 RYDENQ9NUL5 291 aaKnown RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TMEM51Q9NW97 253 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 TRMT1Q9NXH9 659 aaKnown RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 PSD3Q9NYI0 1048 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 MAGEC2Q9UBF1 373 aaPredicted RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 APEX2Q9UBZ4 518 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 LIMD1Q9UGP4 676 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 MUTYHQ9UIF7 546 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 DNAJC12Q9UKB3 198 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 CNTN6Q9UQ52 1028 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 MRPS23Q9Y3D9 190 aaKnown RBP5.55□□□□□ -1.52
SHMT1-211ENST00000618902 PCDHB4Q9Y5E5 795 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 DENND4AQ7Z401 1863 aa5.55□□□□□ -1.52
SHMT1-211ENST00000618902 NCANO14594 1321 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 F8VP50 259 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 O00370 1275 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 PES1O00541 588 aaKnown RBP5.54□□□□□ -1.52
SHMT1-211ENST00000618902 TNFRSF10BO14763 440 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 TRIM66O15016 1216 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 CYP26A1O43174 497 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 URI1O94763 535 aaPredicted RBP5.54□□□□□ -1.52
SHMT1-211ENST00000618902 CLSTN1O94985 981 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 UCHL3P15374 230 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 TCF3P15923 654 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 GJA1P17302 382 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 CEBPBP17676 345 aa5.54□□□□□ -1.52
SHMT1-211ENST00000618902 PSMC3P17980 439 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms