RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 PFKMP08237 780 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 RARBP10826 455 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 GNAT1P11488 350 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 PRKACAP17612 351 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 KRT2P35908 639 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 PCP4P48539 62 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 AARSP49588 968 aaKnown RBP eCLIP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 MMP16P51512 607 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 NR1H2P55055 460 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 BPIFB4P59827 614 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 RAC3P60763 192 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 TSPAN5P62079 268 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 PDE1BQ01064 536 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 SPIDRQ14159 915 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CBX2Q14781 532 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 EFTUD2Q15029 972 aaKnown RBP eCLIP4.27□□□□□ -1.736e-8■■■■■ 34.9
UBE2D3-233ENST00000618836 TXNRD1Q16881 649 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ZNF827Q17R98 1081 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 PLEKHO1Q53GL0 409 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 USP39Q53GS9 565 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 MDH1BQ5I0G3 518 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CEP85LQ5SZL2 805 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 VSIG10LQ86VR7 867 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 SGMS1Q86VZ5 419 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 HEATR4Q86WZ0 1026 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 RHOT2Q8IXI1 618 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CNTD1Q8N815 330 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ZSCAN1Q8NBB4 408 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 GATAD2BQ8WXI9 593 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 SHDQ96IW2 340 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ARHGAP9Q9BRR9 750 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 TRIM62Q9BVG3 475 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 SHCBP1LQ9BZQ2 653 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CCDC86Q9H6F5 360 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 PREBQ9HCU5 417 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 SLC39A2Q9NP94 309 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ITM2CQ9NQX7 267 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 LARSQ9P2J5 1176 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 DNM3Q9UQ16 869 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 DERAQ9Y315 318 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 FADS3Q9Y5Q0 445 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ATP8B3O60423 1300 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 WDR33Q9C0J8 1336 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 PRR36Q9H6K5 1346 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 A0A1W2PPH5 198 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 GOLGA8JA6NMD2 632 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 GOLGA8TH3BQL2 631 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 WNT7AO00755 349 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CASC3O15234 703 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 DGAT1O75907 488 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 HMGN1P05114 100 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 QDPRP09417 244 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 GOLGA8HP0CJ92 632 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CALM1P0DP23 149 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CALM2P0DP24 149 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CALM3P0DP25 149 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CPB1P15086 417 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 KRT4P19013 534 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CASTP20810 708 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 BMI1P35226 326 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 DHPSP49366 369 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ADCY7P51828 1080 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ADARP55265 1226 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 GSDMDP57764 484 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 BMPR2Q13873 1038 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ARHGAP19Q14CB8 494 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 KLHL38Q2WGJ6 581 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 HSP90AA5PQ58FG0 334 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 TMEM67Q5HYA8 995 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 TMEM240Q5SV17 173 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 RBM20Q5T481 1227 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 GGT6Q6P531 493 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 KDM7AQ6ZMT4 941 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 C16orf59Q7L2K0 433 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 DHX32Q7L7V1 743 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 FAM160B2Q86V87 743 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 REXO1L1PQ8IX06 675 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CPA6Q8N4T0 437 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 KDF1Q8NAX2 398 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 NEK11Q8NG66 645 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 OR9A1PQ8NGU1 263 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 HUS1BQ8NHY5 278 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 CREB3L4Q8TEY5 395 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 XAGE3Q8WTP9 111 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 TSPEARQ8WU66 669 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 SYN2Q92777 582 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 NSUN4Q96CB9 384 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 KCTD12Q96CX2 325 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 PIWIL1Q96J94 861 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 OPALINQ96PE5 141 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 WRNIP1Q96S55 665 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 WNT8AQ9H1J5 351 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 DPH5Q9H2P9 285 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 SPACA1Q9HBV2 294 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 DOLKQ9UPQ8 538 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ERVK-19Q9WJR5 959 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 ANKRD6Q9Y2G4 727 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 COMMD3-BMI1R4GMX3 469 aa4.27□□□□□ -1.73
UBE2D3-233ENST00000618836 NCF1BA6NI72 391 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms