RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 SNRNP35Q16560 246 aaKnown RBP11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 ANKS6Q68DC2 871 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 SNRNP48Q6IEG0 339 aaKnown RBP11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 CYB5R4Q7L1T6 521 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 USP33Q8TEY7 942 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 A0A087WXM4 84 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 GNG14A0A1W2PPG7 69 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 SDR42E2A6NKP2 422 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 FAM47E-STBD1D6RA91 191 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 TIMM44O43615 452 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 PDGFRAP16234 1089 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 TBCELQ5QJ74 424 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 BTN2A1Q7KYR7 527 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 CHID1Q9BWS9 393 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 CAPN10Q9HC96 672 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 PP2D1A8MPX8 630 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 ACLYP53396 1101 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 DGKDQ16760 1214 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 DENND5BQ6ZUT9 1274 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 CLVS1Q8IUQ0 354 aaPredicted RBP11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 C9orf16Q9BUW7 83 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 R3HDM2Q9Y2K5 976 aaKnown RBP11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 LOC100506127A0A0U1RQW1 187 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 PGM3O95394 542 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 NFYCQ13952 458 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 Q4G0T1 1027 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 ARMC6Q6NXE6 501 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 CINPQ9BW66 212 aaPredicted RBP11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 CYP39A1Q9NYL5 469 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 S100A6P06703 90 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 XRCC4Q13426 336 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 TPCN2Q8NHX9 752 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 FIG4Q92562 907 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 PRCCQ92733 491 aaPredicted RBP11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 KCND2Q9NZV8 630 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 CNTFP26441 200 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 DPYDQ12882 1025 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 DENND1BQ6P3S1 775 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 FAM228AQ86W67 206 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 SLC7A14Q8TBB6 771 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 CCDC88CQ9P219 2028 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 ALDH1A2O94788 518 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 GH2P01242 217 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 ITGADQ13349 1161 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 PDPK2PQ6A1A2 396 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 ADGRF4Q8IZF3 695 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 NSUN6Q8TEA1 469 aaKnown RBP11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 C7orf25Q9BPX7 421 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 SLITRK2Q9H156 845 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 RAD18Q9NS91 495 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 BCORL1Q5H9F3 1711 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 HNMTP50135 292 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 ERAP2Q6P179 960 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 REXO1L1PQ8IX06 675 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 AGPAT5Q9NUQ2 364 aa11.87□□□□□ -0.51
PCDHA4-204ENST00000618834 STK25O00506 426 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 CASP4P49662 377 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 SLC34A1Q06495 639 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 SLC22A9Q8IVM8 553 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 NRDE2Q9H7Z3 1164 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 TMEM260Q9NX78 707 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 ARID1BQ8NFD5 2236 aaPredicted RBP11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 MROH7-TTC4A0A0A0MT08 1334 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 TSPAN19P0C672 248 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 GRK4P32298 578 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 CLEC17AQ6ZS10 378 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 COMMD2Q86X83 199 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 SPACA6W5XKT8 324 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 NMT2O60551 498 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 PPP2R1BP30154 601 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 PTGER2P43116 358 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 CRKP46108 304 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 STARP49675 285 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 SNX17Q15036 470 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 CCDC153Q494R4 210 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 ERFEQ4G0M1 354 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 NAPEPLDQ6IQ20 393 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 SYNDIG1Q9H7V2 258 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 NCF1BA6NI72 391 aaPredicted RBP11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 NCF1CA8MVU1 366 aaPredicted RBP11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 BAIAP3O94812 1187 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 NCF1P14598 390 aaPredicted RBP11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 TRIM32Q13049 653 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 LENG1Q96BZ8 264 aaPredicted RBP11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 COMMD9Q9P000 198 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 SLC25A13Q9UJS0 675 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 PADI4Q9UM07 663 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 SNX8Q9Y5X2 465 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 VPS26AO75436 327 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 CPB1P15086 417 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 ACADSBP45954 432 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 ARF5P84085 180 aa11.86□□□□□ -0.51
PCDHA4-204ENST00000618834 LMBRD2Q68DH5 695 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms