RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 RHBDF2Q6PJF5 856 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 RASSF3Q86WH2 238 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 C12orf40Q86WS4 652 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 DDX42Q86XP3 938 aaKnown RBP eCLIP22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 HSCBQ8IWL3 235 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 CCDC33Q8N5R6 958 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 PDZD8Q8NEN9 1154 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 SCAMP5Q8TAC9 235 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 OVCA2Q8WZ82 227 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 MED10Q9BTT4 135 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 DMAC2Q9NW81 257 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 MMP17Q9ULZ9 603 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 MYH10P35580 1976 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 THADAQ6YHU6 1953 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 ATP8B3O60423 1300 aa22.06■■□□□ 1.12
TRAPPC3-208ENST00000616074 CHD8Q9HCK8 2581 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 CACNA1BQ00975 2339 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 TNFRSF10BO14763 440 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 COCHO43405 550 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 ACTN4O43707 911 aaKnown RBP22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 HSP90AA1P07900 732 aaKnown RBP22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 SLFN14P0C7P3 912 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 PDIA4P13667 645 aaKnown RBP22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 GBP1P32455 592 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 AP3M2P53677 418 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 SLC5A3P53794 718 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 DLG4P78352 724 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 CREB5Q02930 508 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 DNM1Q05193 864 aaKnown RBP22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 ATL3Q6DD88 541 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 ANO7Q6IWH7 933 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 ZFRQ96KR1 1074 aaKnown RBP22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 EXOC1Q9NV70 894 aa22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 CHORDC1Q9UHD1 332 aaPredicted RBP22.05■■□□□ 1.12
TRAPPC3-208ENST00000616074 CHRM1P11229 460 aaPredicted RBP22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 ADH5P11766 374 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 HNRNPLP14866 589 aaKnown RBP eCLIP22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 EIF2DP41214 584 aaKnown RBP22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 MRPS21P82921 87 aaKnown RBP22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 CRY1Q16526 586 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 KMT5BQ4FZB7 885 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 SLC9A9Q8IVB4 645 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 MDGA1Q8NFP4 955 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 SMARCD1Q96GM5 515 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 PAGE5Q96GU1 130 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 TNIP3Q96KP6 325 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 CNOT6LQ96LI5 555 aaKnown RBP22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 PNKPQ96T60 521 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 KCTD10Q9H3F6 313 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 CCSER2Q9H7U1 834 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 DMAP1Q9NPF5 467 aaPredicted RBP22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 CFAP45Q9UL16 551 aa22.04■■□□□ 1.12
TRAPPC3-208ENST00000616074 BCLAF3A2AJT9 711 aaKnown RBP22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 KAT7O95251 611 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 ADH1CP00326 375 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 KDSRQ06136 332 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 ORC1Q13415 861 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 USP39Q53GS9 565 aaKnown RBP22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 HECTD3Q5T447 861 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 SNX30Q5VWJ9 437 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 PMS2CLQ68D20 193 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 TMEM92Q6UXU6 159 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 ACOT1Q86TX2 421 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 FUKQ8N0W3 1084 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 ALLCQ8N6M5 410 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 KRT82Q9NSB4 513 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 IL37Q9NZH6 218 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 GMIPQ9P107 970 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 TBC1D14Q9P2M4 693 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 HMGXB4Q9UGU5 601 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 RCOR1Q9UKL0 485 aa22.03■■□□□ 1.12
TRAPPC3-208ENST00000616074 E2F8A0AVK6 867 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 AP1G2O75843 785 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 CAVIN2O95810 425 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 APODP05090 189 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 CCDC130P13994 396 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 BCKDHBP21953 392 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 TIE1P35590 1138 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 LY6G5CQ5SRR4 150 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 RNF43Q68DV7 783 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 TTC30AQ86WT1 665 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 IL17RCQ8NAC3 791 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 TXNDC5Q8NBS9 432 aaKnown RBP22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 ZMIZ2Q8NF64 920 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 TMEM174Q8WUU8 243 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 SMOQ99835 787 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 EDEM2Q9BV94 578 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 ZDHHC4Q9NPG8 344 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 ARHGEF4Q9NR80 690 aa22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 MAP1BP46821 2468 aaKnown RBP22.02■■□□□ 1.12
TRAPPC3-208ENST00000616074 FAM92AA1XBS5 289 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 SGK1O00141 431 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 BEST1O76090 585 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 KLF8O95600 359 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 NR3C1P04150 777 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 ZDHHC11BP0C7U3 371 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 TUBP50607 506 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 ZACNQ401N2 412 aa22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 N4BP2L1Q5TBK1 243 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC3-208ENST00000616074 EMC10Q5UCC4 262 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms