RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 EFCAB12Q6NXP0 572 aa13.04□□□□□ -0.32
MSH6-213ENST00000614496 DENND5BQ6ZUT9 1274 aa13.04□□□□□ -0.32
MSH6-213ENST00000614496 CLPTM1LQ96KA5 538 aa13.04□□□□□ -0.32
MSH6-213ENST00000614496 ZNF518BQ9C0D4 1074 aa13.04□□□□□ -0.32
MSH6-213ENST00000614496 PORCNQ9H237 461 aa13.04□□□□□ -0.32
MSH6-213ENST00000614496 NMRK1Q9NWW6 199 aa13.04□□□□□ -0.32
MSH6-213ENST00000614496 TLK1Q9UKI8 766 aa13.04□□□□□ -0.32
MSH6-213ENST00000614496 A0A0B4J269 797 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 PPP1R12AO14974 1030 aaPredicted RBP13.03□□□□□ -0.32
MSH6-213ENST00000614496 DGKIO75912 1065 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 PDE5AO76074 875 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 DPEP1P16444 411 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 SLC12A2P55011 1212 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 CRADDP78560 199 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 MGAT5Q09328 741 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 MAP7Q14244 749 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 DNAL1Q4LDG9 190 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 EFCAB3Q8N7B9 438 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 FAM172AQ8WUF8 416 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 TFAP2BQ92481 460 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 CENPKQ9BS16 269 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 NMUR2Q9GZQ4 415 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 TELO2Q9Y4R8 837 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 TCRBV7S3A2A0A539 114 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 DPPA5A6NC42 116 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 A8MXQ7 604 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 AIM2O14862 343 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 LY6KQ17RY6 165 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 SYNPO2Q9UMS6 1093 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 SPAG6O75602 509 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 HMGCRP04035 888 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 TPBGLP0DKB5 382 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
MSH6-213ENST00000614496 ALADP13716 330 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 ACADSP16219 412 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 ATP6V1C1P21283 382 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 PHKA2P46019 1235 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 EN1Q05925 392 aaPredicted RBP13.03□□□□□ -0.32
MSH6-213ENST00000614496 LAMTOR4Q0VGL1 99 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 CAPSQ13938 189 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 MXD4Q14582 209 aaPredicted RBP13.03□□□□□ -0.32
MSH6-213ENST00000614496 MMEL1Q495T6 779 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 IER5Q5VY09 327 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 CES3Q6UWW8 571 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 ACOT1Q86TX2 421 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 FAM83AQ86UY5 434 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 TEX2Q8IWB9 1127 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 CCNYL1Q8N7R7 359 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 LRGUKQ96M69 825 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 TRIM56Q9BRZ2 755 aaKnown RBP13.03□□□□□ -0.32
MSH6-213ENST00000614496 SLC5A4Q9NY91 659 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 RABGEF1Q9UJ41 708 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 PTPRJQ12913 1337 aa13.03□□□□□ -0.32
MSH6-213ENST00000614496 APOC4-APOC2K7ER74 178 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 GSC2O15499 205 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 APOC2P02655 101 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 KLRC2P26717 231 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 TGFB2P61812 414 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 COG7P83436 770 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 TMEM62Q0P6H9 643 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 ANGEL2Q5VTE6 544 aaKnown RBP13.02□□□□□ -0.32
MSH6-213ENST00000614496 C10orf82Q8WW14 230 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.32
MSH6-213ENST00000614496 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 PACSIN3Q9UKS6 424 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 LRCH1Q9Y2L9 728 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 CYB561D2O14569 222 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 PEX11AO75192 247 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 LRCH4O75427 683 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 EIF4BP23588 611 aaKnown RBP13.02□□□□□ -0.32
MSH6-213ENST00000614496 OGDHQ02218 1023 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 MED21Q13503 144 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 ART3Q13508 389 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 MSS51Q4VC12 460 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 BBS12Q6ZW61 710 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 POLNQ7Z5Q5 900 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 C7orf43Q8WVR3 580 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 CADM1Q9BY67 442 aaKnown RBP13.02□□□□□ -0.32
MSH6-213ENST00000614496 LRRC4Q9HBW1 653 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 ZNF541Q9H0D2 1346 aa13.02□□□□□ -0.32
MSH6-213ENST00000614496 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 MICAL2O94851 1124 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 ASS1P00966 412 aaKnown RBP13.02□□□□□ -0.33
MSH6-213ENST00000614496 PGK2P07205 417 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 MX2P20592 715 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 CCDC15Q0P6D6 951 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 TMEM132DQ14C87 1099 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 C4orf50Q6ZRC1 276 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 SPATA24Q86W54 205 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 CPB2Q96IY4 423 aa13.02□□□□□ -0.33
MSH6-213ENST00000614496 CNPY3Q9BT09 278 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms