RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 CASZ1Q86V15 1759 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 CFAP99D6REC4 459 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 GIPC1O14908 333 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 GMNNO75496 209 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 ESRRBO95718 433 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 SERPINB2P05120 415 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 PTPN2P17706 415 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 JAK1P23458 1154 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 JAM2P57087 298 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 PRKD1Q15139 912 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-218ENST00000608440 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
CTCFL-218ENST00000608440 SLC15A4Q8N697 577 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 SLC5A5Q92911 643 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 FAM111AQ96PZ2 611 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 TRIM56Q9BRZ2 755 aaKnown RBP13.06□□□□□ -0.32
CTCFL-218ENST00000608440 SIX2Q9NPC8 291 aa13.06□□□□□ -0.32
CTCFL-218ENST00000608440 SLC26A4O43511 780 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 SLC16A2P36021 539 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 AP3M2P53677 418 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 TPTEP56180 551 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 KCNC4Q03721 635 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 RALGDSQ12967 914 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 CRY1Q16526 586 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 ZNF746Q6NUN9 644 aaPredicted RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 CCDC81Q6ZN84 652 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 HEATR3Q7Z4Q2 680 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 ITIH5Q86UX2 942 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 LILRB4Q8NHJ6 448 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 GLT8D2Q9H1C3 349 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 C17orf75Q9HAS0 396 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 MINPP1Q9UNW1 487 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 POTEMA6NI47 508 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 SORBS3O60504 671 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 MYO1DO94832 1006 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 FARP2O94887 1054 aaPredicted RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 LDHBP07195 334 aaKnown RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 XRCC5P13010 732 aaKnown RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 PSMC3P17980 439 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 ADSLP30566 484 aaPredicted RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 ALDH3B2P48448 385 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 BCAMP50895 628 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 AQP5P55064 265 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 OTUD4Q01804 1114 aaKnown RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 PTK6Q13882 451 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 PCSK7Q16549 785 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 USP41Q3LFD5 358 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 FGD3Q5JSP0 725 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 PERM1Q5SV97 790 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 DENND5BQ6ZUT9 1274 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 GPR141Q7Z602 305 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 OSTM1Q86WC4 334 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 SNX29Q8TEQ0 813 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 VPS11Q9H270 941 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 MARCH7Q9H992 704 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 COPS7BQ9H9Q2 264 aaPredicted RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 QPCTLQ9NXS2 382 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 CDH22Q9UJ99 828 aa13.05□□□□□ -0.32
CTCFL-218ENST00000608440 ARIH1Q9Y4X5 557 aaPredicted RBP13.05□□□□□ -0.32
CTCFL-218ENST00000608440 C1orf232A0A0U1RR37 186 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 BANF1O75531 89 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ARL1P40616 181 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 MAPK10P53779 464 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ATXN3P54252 364 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 IFITM2Q01629 132 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CARTPTQ16568 116 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ARHGAP44Q17R89 818 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 RARS2Q5T160 578 aaKnown RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 MMAAQ8IVH4 418 aaKnown RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CLIP4Q8N3C7 705 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 JADE3Q92613 823 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ACAP3Q96P50 834 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ZBED2Q9BTP6 218 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 MXD3Q9BW11 206 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CCDC106Q9BWC9 280 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 PSMC3IPQ9P2W1 217 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 ERGIC3Q9Y282 383 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CCDC195A0A1B0GUA6 201 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CCNT2O60583 730 aaKnown RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 LRRN2O75325 713 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 TGDSO95455 350 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 FTLP02792 175 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CALM1P0DP23 149 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CALM2P0DP24 149 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CALM3P0DP25 149 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 P4HA1P13674 534 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 PRDX6P30041 224 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 TM4SF1P30408 202 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CAV1Q03135 178 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 FOXD4Q12950 439 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 MTM1Q13496 603 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 DRAP1Q14919 205 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-218ENST00000608440 EPHA7Q15375 998 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 NRF1Q16656 503 aa13.04□□□□□ -0.32
CTCFL-218ENST00000608440 CCDC58Q4VC31 144 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms