RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 GLUD1P00367 558 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 ATF6P18850 670 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 RPL10AP62906 217 aaKnown RBP11.71□□□□□ -0.54
CTCFL-214ENST00000608108 IFRD2Q12894 506 aaPredicted RBP11.71□□□□□ -0.54
CTCFL-214ENST00000608108 DCUN1D2Q6PH85 259 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 TCEAL8Q8IYN2 117 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.54
CTCFL-214ENST00000608108 STKLD1Q8NE28 680 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 GPR152Q8TDT2 470 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 CLEC4CQ8WTT0 213 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 MCRS1Q96EZ8 462 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 MCEEQ96PE7 176 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.54
CTCFL-214ENST00000608108 ULBP1Q9BZM6 244 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 CNGB3Q9NQW8 809 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.54
CTCFL-214ENST00000608108 MAFFQ9ULX9 164 aa11.71□□□□□ -0.54
CTCFL-214ENST00000608108 SPTBN5Q9NRC6 3674 aaKnown RBP11.71□□□□□ -0.54
CTCFL-214ENST00000608108 TNFRSF10BO14763 440 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 KIF5CO60282 957 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 MTA2O94776 668 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 FBXO21O94952 628 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 ZBED1O96006 694 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 SPATA31D3P0C874 917 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 KRT3P12035 628 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
CTCFL-214ENST00000608108 SLC6A3Q01959 620 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 TCEAL1Q15170 157 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 IFI16Q16666 785 aaKnown RBP11.7□□□□□ -0.54
CTCFL-214ENST00000608108 LRIT3Q3SXY7 679 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 SPATA31D4Q6ZUB0 917 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 DENND5BQ6ZUT9 1274 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 NUP93Q8N1F7 819 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 SCAMP5Q8TAC9 235 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 SPATA17Q96L03 361 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 C16orf45Q96MC5 204 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-214ENST00000608108 LMAN2LQ9H0V9 348 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 ANAPC7Q9UJX3 599 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 FBXW11Q9UKB1 542 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-214ENST00000608108 YIPF1Q9Y548 306 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 CAPN6Q9Y6Q1 641 aa11.7□□□□□ -0.54
CTCFL-214ENST00000608108 SIGLEC16A6NMB1 481 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 SART1O43290 800 aaKnown RBP11.69□□□□□ -0.54
CTCFL-214ENST00000608108 GRAP2O75791 330 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 ALDH1A3P47895 512 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 CLCN4P51793 760 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
CTCFL-214ENST00000608108 DAOAP59103 153 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 RPL7AP62424 266 aaKnown RBP11.69□□□□□ -0.54
CTCFL-214ENST00000608108 TAF5Q15542 800 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 LILRA6Q6PI73 481 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 TPCN2Q8NHX9 752 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 SLC7A14Q8TBB6 771 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 FEZF2Q8TBJ5 459 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 NDRG1Q92597 394 aaKnown RBP11.69□□□□□ -0.54
CTCFL-214ENST00000608108 FAM149B1Q96BN6 582 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 CEP295NLQ96MC4 621 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 ALS2CR12Q96Q35 445 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 TRIM7Q9C029 511 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 INSL5Q9Y5Q6 135 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 USP3Q9Y6I4 520 aa11.69□□□□□ -0.54
CTCFL-214ENST00000608108 PRRC2BQ5JSZ5 2229 aaKnown RBP11.69□□□□□ -0.54
CTCFL-214ENST00000608108 TMEM191CA6NGB0 347 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 RFXAPO00287 272 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 HSF2BPO75031 334 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 CLASP2O75122 1294 aaKnown RBP11.68□□□□□ -0.54
CTCFL-214ENST00000608108 RTN3O95197 1032 aaPredicted RBP11.68□□□□□ -0.54
CTCFL-214ENST00000608108 SCNN1AP37088 669 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 RNASE9P60153 205 aaKnown RBP11.68□□□□□ -0.54
CTCFL-214ENST00000608108 GNG11P61952 73 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 USP46P62068 366 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 TWF1Q12792 350 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 PLD1Q13393 1074 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 PTPROQ16827 1216 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 CCDC149Q6ZUS6 474 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 NYAP1Q6ZVC0 841 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 SLC26A9Q7LBE3 791 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 SCML4Q8N228 414 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 EMC1Q8N766 993 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 KREMEN2Q8NCW0 462 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 JOSD2Q8TAC2 188 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 BTBD6Q96KE9 485 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 CALR3Q96L12 384 aaKnown RBP11.68□□□□□ -0.54
CTCFL-214ENST00000608108 FBXO44Q9H4M3 255 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 ZNF576Q9H609 170 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 TMEM59LQ9UK28 342 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 REV3LO60673 3130 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 GRID2IPA4D2P6 1211 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 SLC38A8A6NNN8 435 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 YJEFN3A6XGL0 299 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 TMEM110-MUSTN1A8MSY1 372 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 E7ENQ6 273 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 MYO1FO00160 1098 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 PER2O15055 1255 aa11.68□□□□□ -0.54
CTCFL-214ENST00000608108 ZNF500O60304 480 aaPredicted RBP11.68□□□□□ -0.54
CTCFL-214ENST00000608108 BUB1BO60566 1050 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms