RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CCL26Q9Y258 94 aa20.3■□□□□ 0.84
SRSF4-206ENST00000605204 ZDHHC11BP0C7U3 371 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 VDRP11473 427 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 MTIF2P46199 727 aaKnown RBP20.29■□□□□ 0.84
SRSF4-206ENST00000605204 PSEN1P49768 467 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 KPNA1P52294 538 aaPredicted RBP20.29■□□□□ 0.84
SRSF4-206ENST00000605204 BCAT1P54687 386 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 IFRD2Q12894 506 aaPredicted RBP20.29■□□□□ 0.84
SRSF4-206ENST00000605204 LRMPQ12912 555 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 UBXN2BQ14CS0 331 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 ITPRIPL2Q3MIP1 535 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 HECTD3Q5T447 861 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 ANKRD52Q8NB46 1076 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 SCAMP5Q8TAC9 235 aa20.29■□□□□ 0.84
SRSF4-206ENST00000605204 INTS2Q9H0H0 1204 aaKnown RBP20.29■□□□□ 0.84
SRSF4-206ENST00000605204 BEST1O76090 585 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 ABL1P00519 1130 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 RPS9P46781 194 aaKnown RBP20.28■□□□□ 0.84
SRSF4-206ENST00000605204 ANGPT1Q15389 498 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 MAN2A1Q16706 1144 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 CCDC183Q5T5S1 534 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 SASS6Q6UVJ0 657 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 GBP6Q6ZN66 633 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 TADA2BQ86TJ2 420 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 IRF2BP1Q8IU81 584 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 DTWD2Q8NBA8 298 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 SH3RF2Q8TEC5 729 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 FAM3CQ92520 227 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 ATP2A3Q93084 1043 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 NKD2Q969F2 451 aaPredicted RBP20.28■□□□□ 0.84
SRSF4-206ENST00000605204 SLC22A12Q96S37 553 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 FOXQ1Q9C009 403 aa20.28■□□□□ 0.84
SRSF4-206ENST00000605204 FANCMQ8IYD8 2048 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 FAM170BA6NMN3 283 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 HHLA1C9JL84 531 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 SLC9A3R1O14745 358 aaPredicted RBP20.27■□□□□ 0.84
SRSF4-206ENST00000605204 SETSIPP0DME0 302 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 CD19P15391 556 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 TMEM270Q6UE05 265 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 CCDC186Q7Z3E2 898 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 CREBRFQ8IUR6 639 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 CPA6Q8N4T0 437 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 ENOX1Q8TC92 643 aaKnown RBP20.27■□□□□ 0.84
SRSF4-206ENST00000605204 OSCP1Q8WVF1 389 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 CLDN23Q96B33 292 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 CYP2S1Q96SQ9 504 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 CDK5RAP1Q96SZ6 601 aaKnown RBP20.27■□□□□ 0.84
SRSF4-206ENST00000605204 GKN1Q9NS71 199 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 ANO10Q9NW15 660 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 GMIPQ9P107 970 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 DLGAP2Q9P1A6 1054 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 PCDHB4Q9Y5E5 795 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 CACNA1AO00555 2505 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 DNAH14Q0VDD8 3507 aa20.27■□□□□ 0.84
SRSF4-206ENST00000605204 MIA3Q5JRA6 1907 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 ACO1P21399 889 aaKnown RBP20.26■□□□□ 0.83
SRSF4-206ENST00000605204 EEF1GP26641 437 aaKnown RBP20.26■□□□□ 0.83
SRSF4-206ENST00000605204 CTHP32929 405 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 IFNAR2P48551 515 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 KIF11P52732 1056 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 BST2Q10589 180 aaKnown RBP20.26■□□□□ 0.83
SRSF4-206ENST00000605204 RUNX3Q13761 415 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 EXOC3L4Q17RC7 722 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 KLHDC10Q6PID8 442 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 TRIM65Q6PJ69 517 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 GPIHBP1Q8IV16 184 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 ARHGAP18Q8N392 663 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 ZFYVE19Q96K21 471 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 NACA2Q9H009 215 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 CYLDQ9NQC7 956 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 TSPAN16Q9UKR8 245 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 USP3Q9Y6I4 520 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 PATJQ8NI35 1801 aa20.26■□□□□ 0.83
SRSF4-206ENST00000605204 SPECC1L-ADORA2AF8WAN1 911 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 O00370 1275 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 XPO1O14980 1071 aaKnown RBP20.25■□□□□ 0.83
SRSF4-206ENST00000605204 TLR5O60602 858 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 MBL2P11226 248 aaPredicted RBP20.25■□□□□ 0.83
SRSF4-206ENST00000605204 TARSP26639 723 aaKnown RBP20.25■□□□□ 0.83
SRSF4-206ENST00000605204 MFAP3P55082 362 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 LRRC32Q14392 662 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 STX1AQ16623 288 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 GOLGA7BQ2TAP0 167 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 ZNF276Q8N554 614 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 DUS2Q9NX74 493 aaKnown RBP20.25■□□□□ 0.83
SRSF4-206ENST00000605204 GTSE1Q9NYZ3 720 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 CLIC5Q9NZA1 410 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 APEX2Q9UBZ4 518 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 CHORDC1Q9UHD1 332 aaPredicted RBP20.25■□□□□ 0.83
SRSF4-206ENST00000605204 CNTN6Q9UQ52 1028 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 CPQQ9Y646 472 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 EP300Q09472 2414 aaPredicted RBP20.25■□□□□ 0.83
SRSF4-206ENST00000605204 OBSL1O75147 1896 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 COL4A2P08572 1712 aa20.25■□□□□ 0.83
SRSF4-206ENST00000605204 LEFTY2O00292 366 aa20.24■□□□□ 0.83
SRSF4-206ENST00000605204 COCHO43405 550 aa20.24■□□□□ 0.83
SRSF4-206ENST00000605204 NFATC1O95644 943 aa20.24■□□□□ 0.83
SRSF4-206ENST00000605204 DCNP07585 359 aaKnown RBP20.24■□□□□ 0.83
SRSF4-206ENST00000605204 ZNF132P52740 706 aa20.24■□□□□ 0.83
SRSF4-206ENST00000605204 GOLGA8FQ08AF8 430 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms