RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SIX1Q15475 284 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PTPROQ16827 1216 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SLC25A52Q3SY17 297 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PAN2Q504Q3 1202 aaKnown RBP12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ODF2Q5BJF6 829 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FBXO38Q6PIJ6 1188 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SCUBE3Q8IX30 993 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 IFT20Q8IY31 132 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZMIZ2Q8NF64 920 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FAM71BQ8TC56 605 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PGAP3Q96FM1 320 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 C8orf48Q96LL4 319 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SLITRK1Q96PX8 696 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SLC9A7Q96T83 725 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LRRC1Q9BTT6 524 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 OSBPL8Q9BZF1 889 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 HSFX1Q9UBD0 423 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 USP18Q9UMW8 372 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TIMM13Q9Y5L4 95 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 USP3Q9Y6I4 520 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 I3L4J1 428 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CLDN5O00501 218 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PRPSAP2O60256 369 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TRUB2O95900 331 aaKnown RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 KRT1P04264 644 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RHOXF2BP0C7M4 288 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LAG3P18627 525 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MIPP30301 263 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ALDH7A1P49419 539 aaKnown RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TKTL1P51854 596 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZNF135P52742 658 aaPredicted RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DRG2P55039 364 aaKnown RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MAP3K7CLP57077 242 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LMNB2Q03252 620 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PPIGQ13427 754 aaKnown RBP eCLIP12.86□□□□□ -0.356e-7■□□□□ 11.1
NEDD8-MDP1-203ENST00000604306 CUL1Q13616 776 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SMC1AQ14683 1233 aaKnown RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TRNP1Q6NT89 227 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SPOCD1Q6ZMY3 1216 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CPNE8Q86YQ8 564 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MAP7D3Q8IWC1 876 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ARFGAP1Q8N6T3 406 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 EMC1Q8N766 993 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PRELID2Q8N945 189 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 GRK7Q8WTQ7 553 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PIWIL1Q96J94 861 aaKnown RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PNKPQ96T60 521 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 KRT12Q99456 494 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LPIN3Q9BQK8 851 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RHOXF2Q9BQY4 288 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RAB17Q9H0T7 212 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CWH43Q9H720 699 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 POPDC2Q9HBU9 364 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 IL23AQ9NPF7 189 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 GDF3Q9NR23 364 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SMARCAL1Q9NZC9 954 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RCOR3Q9P2K3 495 aaPredicted RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 USTQ9Y2C2 406 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PRG3Q9Y2Y8 225 aaPredicted RBP12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 hCG_1818297A0A087WSY0 165 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FAM170AA1A519 330 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 C3orf70A6NLC5 250 aaPredicted RBP12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BEST1O76090 585 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZBED1O96006 694 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LCP1P13796 627 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 IBSPP21815 317 aaPredicted RBP12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CDKN2BP42772 138 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BCAR1P56945 870 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 WDR5P61964 334 aaKnown RBP12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 GPR17Q13304 367 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CCNG2Q16589 344 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CTXN3Q4LDR2 81 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FAM171A1Q5VUB5 890 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TMCO3Q6UWJ1 677 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.85□□□□□ -0.357e-16■■■□□ 19.1
NEDD8-MDP1-203ENST00000604306 CCDC50Q8IVM0 306 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FAM172AQ8WUF8 416 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TSC1Q92574 1164 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NPY6RQ99463 290 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TTPALQ9BTX7 342 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 AP1M1Q9BXS5 423 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MAFFQ9ULX9 164 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PCDHB5Q9Y5E4 795 aa12.85□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MTCL1Q9Y4B5 1905 aaKnown RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TNFRSF10BO14763 440 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NDC80O14777 642 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms