RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 RPL17P18621 184 aaKnown RBP17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 CASQ1P31415 396 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 NDUFV1P49821 464 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 TKTL1P51854 596 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 ERVK-21P61565 698 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 MRPS5P82675 430 aaKnown RBP17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 PM20D1Q6GTS8 502 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 TRNP1Q6NT89 227 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 DAAM2Q86T65 1068 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 ATAD1Q8NBU5 361 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 SPPL3Q8TCT6 385 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 CLEC4CQ8WTT0 213 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 IRGQQ8WZA9 623 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 SPATA17Q96L03 361 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 GUCD1Q96NT3 240 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 PGLYRP2Q96PD5 576 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 TGS1Q96RS0 853 aaKnown RBP17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 ULBP1Q9BZM6 244 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 TTYH1Q9H313 450 aaPredicted RBP17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 IP6K2Q9UHH9 426 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 ALG6Q9Y672 507 aa17.25■□□□□ 0.35
U2AF1L4-220ENST00000600296 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 FAM92AA1XBS5 289 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 C2CD2LO14523 706 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 DAB1O75553 588 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 FTCDO95954 541 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 ATF2P15336 505 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 RFC1P35251 1148 aaPredicted RBP17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 GRIK1P39086 918 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 PBX2P40425 430 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 SLC1A1P43005 524 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 SLC5A3P53794 718 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 MESDQ14696 234 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 EFHC1Q5JVL4 640 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 DCUN1D2Q6PH85 259 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 SPRED2Q7Z698 418 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 SCUBE3Q8IX30 993 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 SIX6OS1Q8N1H7 587 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 ZNF461Q8TAF7 563 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 AUTS2Q8WXX7 1259 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 HES6Q96HZ4 224 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 C11orf84Q9BUA3 381 aaPredicted RBP17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 COMMD8Q9NX08 183 aa17.24■□□□□ 0.35
U2AF1L4-220ENST00000600296 TEX28O15482 410 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 HSF2BPO75031 334 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 COMTP21964 271 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 CTNNA2P26232 953 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 FLT3P36888 993 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 CDR1P51861 262 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 ARPP19P56211 112 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 PIGHQ14442 188 aaPredicted RBP17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 ACAP1Q15027 740 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 RAB30Q15771 203 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 BEND5Q7L4P6 421 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 PEX26Q7Z412 305 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 CPNE8Q86YQ8 564 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 SLC2A13Q96QE2 648 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 PBX4Q9BYU1 374 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 AMFRQ9UKV5 643 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 MYO7AQ13402 2215 aa17.23■□□□□ 0.35
U2AF1L4-220ENST00000600296 MIF4GDA9UHW6 222 aaKnown RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 ENC1O14682 589 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 DDX3YO15523 660 aaKnown RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 ZBED1O96006 694 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 C1RP00736 705 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 CNPP09543 421 aaKnown RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 PRLRP16471 622 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 ATF6P18850 670 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 GPD1P21695 349 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 DNAJB1P25685 340 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 DNAJB2P25686 324 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 PTPN9P43378 593 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 GPR15P49685 360 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 ZNF143P52747 638 aaPredicted RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 ERVFC1P60507 584 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 RPL10AP62906 217 aaKnown RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 DUSP4Q13115 394 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 CAMK1Q14012 370 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 SMC1AQ14683 1233 aaKnown RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 TAF5Q15542 800 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 BNIPLQ7Z465 357 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 SCN4BQ8IWT1 228 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 NUP93Q8N1F7 819 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 EMC1Q8N766 993 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 POF1BQ8WVV4 589 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 DDX23Q9BUQ8 820 aaKnown RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 TTLL2Q9BWV7 592 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 ALG13Q9NP73 1137 aaKnown RBP17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 TLR9Q9NR96 1032 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 SNX12Q9UMY4 172 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 HYOU1Q9Y4L1 999 aa17.22■□□□□ 0.35
U2AF1L4-220ENST00000600296 H3BNC9 293 aa17.21■□□□□ 0.35
U2AF1L4-220ENST00000600296 NCK2O43639 380 aa17.21■□□□□ 0.35
U2AF1L4-220ENST00000600296 RTN3O95197 1032 aaPredicted RBP17.21■□□□□ 0.35
U2AF1L4-220ENST00000600296 SEC24AO95486 1093 aa17.21■□□□□ 0.35
U2AF1L4-220ENST00000600296 CTNNA1P35221 906 aaKnown RBP17.21■□□□□ 0.35
U2AF1L4-220ENST00000600296 TUFMP49411 452 aaKnown RBP17.21■□□□□ 0.35
U2AF1L4-220ENST00000600296 DDR2Q16832 855 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms