RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TMEM86AQ8N2M4 240 aa14.6□□□□□ -0.07
IRF3-225ENST00000600022 GUF1Q8N442 669 aaKnown RBP14.6□□□□□ -0.07
IRF3-225ENST00000600022 CPA6Q8N4T0 437 aa14.6□□□□□ -0.07
IRF3-225ENST00000600022 CACTINQ8WUQ7 758 aaKnown RBP14.6□□□□□ -0.07
IRF3-225ENST00000600022 MYLPFQ96A32 169 aa14.6□□□□□ -0.07
IRF3-225ENST00000600022 DHTKD1Q96HY7 919 aaPredicted RBP14.6□□□□□ -0.07
IRF3-225ENST00000600022 MRPL45Q9BRJ2 306 aaKnown RBP14.6□□□□□ -0.07
IRF3-225ENST00000600022 INTS13Q9NVM9 706 aa14.6□□□□□ -0.07
IRF3-225ENST00000600022 RWDD2AQ9UIY3 292 aa14.6□□□□□ -0.07
IRF3-225ENST00000600022 ANGPTL2Q9UKU9 493 aa14.6□□□□□ -0.07
IRF3-225ENST00000600022 ITGA11Q9UKX5 1188 aa14.6□□□□□ -0.07
IRF3-225ENST00000600022 UBE4BO95155 1302 aa14.6□□□□□ -0.07
IRF3-225ENST00000600022 ANAPC1Q9H1A4 1944 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 SOBPA7XYQ1 873 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 FOXD2O60548 495 aaPredicted RBP14.59□□□□□ -0.07
IRF3-225ENST00000600022 AKAP3O75969 853 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 APBB3O95704 486 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 TOP3BO95985 862 aaKnown RBP14.59□□□□□ -0.07
IRF3-225ENST00000600022 SPINK2P20155 84 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 DGKEP52429 567 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 NCAPHQ15003 741 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 BMT2Q1RMZ1 405 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 RNF43Q68DV7 783 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 PSAPL1Q6NUJ1 521 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 FOXR2Q6PJQ5 311 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 TMEM92Q6UXU6 159 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 EPM2AIP1Q7L775 607 aaPredicted RBP14.59□□□□□ -0.07
IRF3-225ENST00000600022 TOP6BLQ8N6T0 577 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 USP33Q8TEY7 942 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 HPDLQ96IR7 371 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 SYT15Q9BQS2 421 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 TMEM206Q9H813 350 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 SLC39A2Q9NP94 309 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 VPS45Q9NRW7 570 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 UXTQ9UBK9 157 aaPredicted RBP14.59□□□□□ -0.07
IRF3-225ENST00000600022 EBF1Q9UH73 591 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 EXOC7Q9UPT5 735 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 CTNND2Q9UQB3 1225 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 PCDHB13Q9Y5F0 798 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 PCDHGA5Q9Y5G8 931 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 MYO16Q9Y6X6 1858 aa14.59□□□□□ -0.07
IRF3-225ENST00000600022 BCLAF3A2AJT9 711 aaKnown RBP14.58□□□□□ -0.08
IRF3-225ENST00000600022 LEFTY2O00292 366 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 EIF3DO15371 548 aaKnown RBP eCLIP14.58□□□□□ -0.08
IRF3-225ENST00000600022 LDHAP00338 332 aaKnown RBP14.58□□□□□ -0.08
IRF3-225ENST00000600022 SERPINC1P01008 464 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.08
IRF3-225ENST00000600022 GBP1P32455 592 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 GRIK1P39086 918 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 LHX1P48742 406 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 AMPD2Q01433 879 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 CYP27A1Q02318 531 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 ALCAMQ13740 583 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 FBXO43Q4G163 708 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 ANO7Q6IWH7 933 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 ADGRG2Q8IZP9 1017 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 GPD1LQ8N335 351 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 RDH13Q8NBN7 331 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 SCFD1Q8WVM8 642 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 NELFBQ8WX92 580 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 RLN3Q8WXF3 142 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 DDX1Q92499 740 aaKnown RBP14.58□□□□□ -0.08
IRF3-225ENST00000600022 ATP2A3Q93084 1043 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 ELMO3Q96BJ8 720 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 PDLIM2Q96JY6 352 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 MED15Q96RN5 788 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 SMPD4Q9NXE4 827 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 MAGEC2Q9UBF1 373 aaPredicted RBP14.58□□□□□ -0.08
IRF3-225ENST00000600022 ARHGAP26Q9UNA1 814 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 NFE2L3Q9Y4A8 694 aa14.58□□□□□ -0.08
IRF3-225ENST00000600022 LNP1A1A4G5 178 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 ZNF840PA6NDX5 716 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 FGFR1OPO95684 399 aaKnown RBP14.57□□□□□ -0.08
IRF3-225ENST00000600022 TMEM191BP0C7N4 346 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 PCSK1P29120 753 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 MAGEA11P43364 429 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 ZNF75DP51815 510 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 STXBP4Q6ZWJ1 553 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 FILIP1Q7Z7B0 1213 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 C12orf40Q86WS4 652 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 TTC30AQ86WT1 665 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 MDGA1Q8NFP4 955 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 PCED1BQ96HM7 432 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 FUBP3Q96I24 572 aaKnown RBP eCLIP14.57□□□□□ -0.08
IRF3-225ENST00000600022 TSG101Q99816 390 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 EDEM2Q9BV94 578 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 DPEP3Q9H4B8 488 aa14.57□□□□□ -0.08
IRF3-225ENST00000600022 CACNA1GO43497 2377 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 F8VP50 259 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 CLDN5O00501 218 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 CDX4O14627 284 aaPredicted RBP14.56□□□□□ -0.08
IRF3-225ENST00000600022 ABL1P00519 1130 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 CYP17A1P05093 508 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 TPM2P07951 284 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 CDC25BP30305 580 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 IRX4P78413 519 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 SHC2P98077 582 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 ELF2Q15723 593 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 FILIP1LQ4L180 1135 aa14.56□□□□□ -0.08
IRF3-225ENST00000600022 ZCWPW2Q504Y3 356 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms