RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	NUP85	Q9BW27	656 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	AGO2	Q9UKV8	859 aa	Known RBP	11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	DOCK1	Q14185	1865 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335		A0A0A6YYK5	440 aa	Predicted RBP	11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CARNS1	A5YM72	827 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	BTNL10	A8MVZ5	291 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ATP2A1	O14983	1001 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ADCY8	P40145	1251 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ACLY	P53396	1101 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	DR1	Q01658	176 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ZNF449	Q6P9G9	518 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	LMO3	Q8TAP4	145 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	VPS50	Q96JG6	964 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	UROC1	Q96N76	676 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	MSTO1	Q9BUK6	570 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	C12orf4	Q9NQ89	552 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	LRFN2	Q9ULH4	789 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ADGRA3	Q8IWK6	1321 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	C17orf102	A2RUQ5	167 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	GOLGA8M	H3BSY2	632 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PSEN2	P49810	448 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	RNASEL	Q05823	741 aa	Known RBP	11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CYP24A1	Q07973	514 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CRY1	Q16526	586 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	RNF220	Q5VTB9	566 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	SPOPL	Q6IQ16	392 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ACTRT1	Q8TDG2	376 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	EPS8L1	Q8TE68	723 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	MAGOHB	Q96A72	148 aa	Known RBP	11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	MTG1	Q9BT17	334 aa	Predicted RBP	11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	XPNPEP1	Q9NQW7	623 aa		11.81	□□□□□ -0.52
SUPT5H-216	ENST00000599335	TRIM64	A6NGJ6	449 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	TRIM64B	A6NI03	449 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	SPATA31C2	B4DYI2	1134 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335		H0YC42	278 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CCDC188	H7C350	402 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	TREH	O43280	583 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	COMT	P21964	271 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	RFC5	P40937	340 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PCDHB18P	Q96TA0	734 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CNOT8	Q9UFF9	292 aa	Known RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	COG5	Q9UP83	839 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	MUSK	O15146	869 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CYP11B1	P15538	503 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ATP5D	P30049	168 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CTNNA1	P35221	906 aa	Known RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	TRIM60	Q495X7	471 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	C1orf220	Q5T0J3	134 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	BBOF1	Q8ND07	529 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	OR2W6P	Q8NHA6	318 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	DQX1	Q8TE96	717 aa	Known RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	HNRNPAB	Q99729	332 aa	Known RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	MIS12	Q9H081	205 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	RBAK	Q9NYW8	714 aa	Predicted RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CIDEB	Q9UHD4	219 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PIN4	Q9Y237	131 aa	Known RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	UST	Q9Y2C2	406 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	SCN4A	P35499	1836 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335		A0A0B4J203	849 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	STMND1	H3BQB6	276 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	DUSP11	O75319	330 aa	Known RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	KATNA1	O75449	491 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	NPTXR	O95502	500 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	STAMBP	O95630	424 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	KRT19	P08727	400 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	FAP	Q12884	760 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	FIP1L1	Q6UN15	594 aa	Known RBP	11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CCDC105	Q8IYK2	499 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	CPA5	Q8WXQ8	436 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	KRT35	Q92764	455 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	SMC6	Q96SB8	1091 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	OSBPL7	Q9BZF2	842 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	IMPG2	Q9BZV3	1241 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	FANCF	Q9NPI8	374 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PCDHB4	Q9Y5E5	795 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335	NR2E3	Q9Y5X4	410 aa		11.8	□□□□□ -0.52
SUPT5H-216	ENST00000599335		H0YCG3	227 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	IDO1	P14902	403 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	MARCKSL1	P49006	195 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PHEX	P78562	749 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ALS2CL	Q60I27	953 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	C12orf56	Q8IXR9	622 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	KIAA1958	Q8N8K9	716 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	SCAI	Q8N9R8	606 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	TRPV1	Q8NER1	839 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PSPC1	Q8WXF1	523 aa	Known RBP	11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PRCC	Q92733	491 aa	Predicted RBP	11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	GDF3	Q9NR23	364 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	NR2E1	Q9Y466	385 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	MSC	O60682	206 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PRKACA	P17612	351 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	SERPINB3	P29508	390 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	PLTP	P55058	493 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	TUBA4A	P68366	448 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	GRIK4	Q16099	956 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	SLC39A4	Q6P5W5	647 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	TMEM270	Q6UE05	265 aa		11.79	□□□□□ -0.52
SUPT5H-216	ENST00000599335	ABHD15	Q6UXT9	468 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms