RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 PCDHGC3Q9UN70 934 aa19.19■□□□□ 0.66
LIG1-216ENST00000598938 ITIH6Q6UXX5 1313 aa19.19■□□□□ 0.66
LIG1-216ENST00000598938 FAM92AA1XBS5 289 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 CFHP08603 1231 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 CYP11B1P15538 503 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 CDC25CP30307 473 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 PLA2G4AP47712 749 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 OTOP3Q7RTS5 596 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 PIGZQ86VD9 579 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 SCAMP5Q8TAC9 235 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 ACSF2Q96CM8 615 aaPredicted RBP19.18■□□□□ 0.66
LIG1-216ENST00000598938 MYADMQ96S97 322 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 NUP58Q9BVL2 599 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.18■□□□□ 0.666e-7■■■■□ 24.2
LIG1-216ENST00000598938 ZNF292O60281 2723 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 DMDP11532 3685 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 DOCK6Q96HP0 2047 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 DCHS1Q96JQ0 3298 aa19.18■□□□□ 0.66
LIG1-216ENST00000598938 A0A1W2PQJ5 194 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 A0A1W2PRU2 124 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 TULP2O00295 520 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 TADA3O75528 432 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 ASGR2P07307 311 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 AOC1P19801 751 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 GPD2P43304 727 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 PDE6CP51160 858 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 KIF11P52732 1056 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 RAB41Q5JT25 222 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 DENND1BQ6P3S1 775 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 NPAS3Q8IXF0 933 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 EPS8L1Q8TE68 723 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 SLC35F5Q8WV83 523 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 ING5Q8WYH8 240 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 DDX1Q92499 740 aaKnown RBP19.17■□□□□ 0.66
LIG1-216ENST00000598938 FGF13Q92913 245 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 SECISBP2LQ93073 1101 aaKnown RBP19.17■□□□□ 0.66
LIG1-216ENST00000598938 IQCDQ96DY2 449 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 LIMD1Q9UGP4 676 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 CDH7Q9ULB5 785 aa19.17■□□□□ 0.66
LIG1-216ENST00000598938 ZFP37Q9Y6Q3 630 aaPredicted RBP19.17■□□□□ 0.66
LIG1-216ENST00000598938 GJA1P17302 382 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 YWHAQP27348 245 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 PLCB2Q00722 1185 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 TEAD2Q15562 447 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 CWF19L1Q69YN2 538 aaKnown RBP19.16■□□□□ 0.66
LIG1-216ENST00000598938 POTEHQ6S545 545 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 NOP9Q86U38 636 aaKnown RBP19.16■□□□□ 0.66
LIG1-216ENST00000598938 ZNF677Q86XU0 584 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 VSTM4Q8IW00 320 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 CCDC105Q8IYK2 499 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 KCTD13Q8WZ19 329 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 OVCA2Q8WZ82 227 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 GCNAQ96QF7 691 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 LHX5Q9H2C1 402 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 ATXN3LQ9H3M9 355 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 SMOC2Q9H3U7 446 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 FBXO44Q9H4M3 255 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 EPS15L1Q9UBC2 864 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 NOCTQ9UK39 431 aaKnown RBP19.16■□□□□ 0.66
LIG1-216ENST00000598938 USP3Q9Y6I4 520 aa19.16■□□□□ 0.66
LIG1-216ENST00000598938 LRRC53A6NM62 1247 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 FERP16591 822 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 GBP2P32456 591 aaPredicted RBP19.15■□□□□ 0.66
LIG1-216ENST00000598938 KRT9P35527 623 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 ID4P47928 161 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 CYP4F8P98187 520 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 IFRD2Q12894 506 aaPredicted RBP19.15■□□□□ 0.66
LIG1-216ENST00000598938 TAF10Q12962 218 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 SPECC1LQ69YQ0 1117 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 PMF1Q6P1K2 205 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 GPIHBP1Q8IV16 184 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 FMNL3Q8IVF7 1028 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 PDZD8Q8NEN9 1154 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 FBXO32Q969P5 355 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 SLITRK1Q96PX8 696 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 TRIM5Q9C035 493 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 GDE1Q9NZC3 331 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 CAPN11Q9UMQ6 739 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 DUSP12Q9UNI6 340 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 SCML2Q9UQR0 700 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 NCANO14594 1321 aa19.15■□□□□ 0.66
LIG1-216ENST00000598938 MYH10P35580 1976 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 GABBR2O75899 941 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 GYPCP04921 128 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 LAMP2P13473 410 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 PPP3CCP48454 512 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 RPL34P49207 117 aaKnown RBP19.14■□□□□ 0.65
LIG1-216ENST00000598938 TDGQ13569 410 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 ARHGAP15Q53QZ3 475 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 STXBP5Q5T5C0 1151 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 IRF2BP2Q7Z5L9 587 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 WDTC1Q8N5D0 677 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 STK32AQ8WU08 396 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 SLC20A1Q8WUM9 679 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 HSFY1Q96LI6 401 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 SEMA4AQ9H3S1 761 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 TRPM5Q9NZQ8 1165 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 CYTH4Q9UIA0 394 aa19.14■□□□□ 0.65
LIG1-216ENST00000598938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.14■□□□□ 0.654e-9■■■□□ 16.1
LIG1-216ENST00000598938 OBSL1O75147 1896 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms