RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 N4BP2L1Q5TBK1 243 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 EMC10Q5UCC4 262 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 RESP18Q5W5W9 173 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 C12orf56Q8IXR9 622 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 ALLCQ8N6M5 410 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 SCAMP5Q8TAC9 235 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 FBXO32Q969P5 355 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 EXOC4Q96A65 974 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 CHAMP1Q96JM3 812 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 CEP295NLQ96MC4 621 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 SLITRK1Q96PX8 696 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 EDEM2Q9BV94 578 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 CCSER2Q9H7U1 834 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 MAGEF1Q9HAY2 307 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 EBF1Q9UH73 591 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 PCDHGA5Q9Y5G8 931 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 MUC22E2RYF6 1773 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 PATE3B3GLJ2 98 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 SGK1O00141 431 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 COCHO43405 550 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 FOXD2O60548 495 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 IRF1P10914 325 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 PFKLP17858 780 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 YWHAQP27348 245 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 ME1P48163 572 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 PGFP49763 221 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 SLC5A3P53794 718 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 STK4Q13043 487 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 ELF2Q15723 593 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 PMS2CLQ68D20 193 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 RNF43Q68DV7 783 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 RHBDF2Q6PJF5 856 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 RASSF3Q86WH2 238 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 ADGRG2Q8IZP9 1017 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 NUP93Q8N1F7 819 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 FRMD1Q8N878 549 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 TXNDC5Q8NBS9 432 aaKnown RBP12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 ZMIZ2Q8NF64 920 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 VPS45Q9NRW7 570 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 KRT82Q9NSB4 513 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 GMIPQ9P107 970 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 CHORDC1Q9UHD1 332 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 PTPRBP23467 1997 aa12.85□□□□□ -0.35
SOX2-OT-228ENST00000597828 FRYQ5TBA9 3013 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 BCLAF3A2AJT9 711 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 TNFRSF10BO14763 440 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 BEST1O76090 585 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 KAT7O95251 611 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 KLF8O95600 359 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 CAVIN2O95810 425 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 C4BPAP04003 597 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 ADH5P11766 374 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 ATICP31939 592 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 PPP3CCP48454 512 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 SNRPFP62306 86 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 DNM1Q05193 864 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 NCOA4Q13772 614 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 NUMA1Q14980 2115 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 CRY1Q16526 586 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 LY6G5CQ5SRR4 150 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 SPOPLQ6IQ16 392 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 BBS7Q8IWZ6 715 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 FUKQ8N0W3 1084 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 PHTF2Q8N3S3 785 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 NAT16Q8N8M0 369 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 IL17RCQ8NAC3 791 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 PNKPQ96T60 521 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 FAM49BQ9NUQ9 324 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 FAM13BQ9NYF5 915 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 EHD2Q9NZN4 543 aa12.84□□□□□ -0.35
SOX2-OT-228ENST00000597828 WDFY3Q8IZQ1 3526 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 PVALEFA0A1B0GWK0 134 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 GIPC1O14908 333 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 TRIM24O15164 1050 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 ADAM23O75077 832 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 AP1G2O75843 785 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 RHOBTB1O94844 696 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 RTN3O95197 1032 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 APODP05090 189 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 PMLP29590 882 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 ST3GAL2Q16842 350 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 KMT5BQ4FZB7 885 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 ARMCX6Q7L4S7 300 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 GPRIN1Q7Z2K8 1008 aa12.83□□□□□ -0.36
SOX2-OT-228ENST00000597828 SNX21Q969T3 373 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms