RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 MED15Q96RN5 788 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 SRRTQ9BXP5 876 aaKnown RBP13.81□□□□□ -0.2
USE1-207ENST00000596136 DUSP16Q9BY84 665 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 UBXN6Q9BZV1 441 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 CLSTN2Q9H4D0 955 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 FBXO44Q9H4M3 255 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 EBF3Q9H4W6 596 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 CHORDC1Q9UHD1 332 aaPredicted RBP13.81□□□□□ -0.2
USE1-207ENST00000596136 RWDD2AQ9UIY3 292 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 WDR87Q6ZQQ6 2873 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 LEFTY2O00292 366 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 TRDMT1O14717 391 aaKnown RBP13.8□□□□□ -0.2
USE1-207ENST00000596136 ARSAP15289 507 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 ADORA2BP29275 332 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 KIF11P52732 1056 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 STX17P56962 302 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 CCINQ13939 588 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 GAS6Q14393 721 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 EML3Q32P44 896 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 DGKKQ5KSL6 1271 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 HECTD3Q5T447 861 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 SYNPOQ8N3V7 929 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 MLKLQ8NB16 471 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 TTC8Q8TAM2 541 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 HEXIM2Q96MH2 286 aaKnown RBP13.8□□□□□ -0.2
USE1-207ENST00000596136 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 PRMT8Q9NR22 394 aaPredicted RBP13.8□□□□□ -0.2
USE1-207ENST00000596136 LMBRD1Q9NUN5 540 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 SPATA6Q9NWH7 488 aaPredicted RBP13.8□□□□□ -0.2
USE1-207ENST00000596136 DUS2Q9NX74 493 aaKnown RBP13.8□□□□□ -0.2
USE1-207ENST00000596136 SCML2Q9UQR0 700 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 USP3Q9Y6I4 520 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 PTPRZ1P23471 2315 aaPredicted RBP13.8□□□□□ -0.2
USE1-207ENST00000596136 FAM186AA6NE01 2351 aa13.8□□□□□ -0.2
USE1-207ENST00000596136 COCHO43405 550 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 LAMTOR5O43504 91 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 FGFR1OPO95684 399 aaKnown RBP13.79□□□□□ -0.2
USE1-207ENST00000596136 TBXAS1P24557 533 aaPredicted RBP13.79□□□□□ -0.2
USE1-207ENST00000596136 GJA4P35212 333 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 PGFP49763 221 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 YWHAEP62258 255 aaKnown RBP13.79□□□□□ -0.2
USE1-207ENST00000596136 AMPD2Q01433 879 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 KCNH2Q12809 1159 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 IFRD2Q12894 506 aaPredicted RBP13.79□□□□□ -0.2
USE1-207ENST00000596136 MTAPQ13126 283 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 LRRC32Q14392 662 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 ZNF394Q53GI3 561 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 TMEM196Q5HYL7 178 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 GPRIN1Q7Z2K8 1008 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
USE1-207ENST00000596136 ZNF276Q8N554 614 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 ANKRD52Q8NB46 1076 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 ZFRQ96KR1 1074 aaKnown RBP13.79□□□□□ -0.2
USE1-207ENST00000596136 LINC00597Q9H2U6 94 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 SEMA4AQ9H3S1 761 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 GMIPQ9P107 970 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 KIAA1257Q9ULG3 409 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 CPQQ9Y646 472 aa13.79□□□□□ -0.2
USE1-207ENST00000596136 PAPSS2O95340 614 aaPredicted RBP13.78□□□□□ -0.2
USE1-207ENST00000596136 ABL1P00519 1130 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 TDGF1P13385 188 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
USE1-207ENST00000596136 IFNAR2P48551 515 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 CETN1Q12798 172 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 PON2Q15165 354 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 RAB41Q5JT25 222 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 CCDC186Q7Z3E2 898 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 ADGRG2Q8IZP9 1017 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 SPEM1Q8N4L4 309 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 CPA6Q8N4T0 437 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 EHBP1Q8NDI1 1231 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 CCSER2Q9H7U1 834 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 TLR8Q9NR97 1041 aaKnown RBP13.78□□□□□ -0.2
USE1-207ENST00000596136 WNT6Q9Y6F9 365 aa13.78□□□□□ -0.2
USE1-207ENST00000596136 E2F8A0AVK6 867 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 SLC9A3R1O14745 358 aaPredicted RBP13.77□□□□□ -0.21
USE1-207ENST00000596136 NFATC1O95644 943 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 AFPP02771 609 aaKnown RBP13.77□□□□□ -0.21
USE1-207ENST00000596136 MBL2P11226 248 aaPredicted RBP13.77□□□□□ -0.21
USE1-207ENST00000596136 GCNT1Q02742 428 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 NR1H3Q13133 447 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 KLHDC10Q6PID8 442 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 TTC30AQ86WT1 665 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 ZBTB44Q8NCP5 570 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 NT5C1BQ96P26 610 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 FAM126AQ9BYI3 521 aaPredicted RBP13.77□□□□□ -0.21
USE1-207ENST00000596136 RBM12Q9NTZ6 932 aaKnown RBP13.77□□□□□ -0.21
USE1-207ENST00000596136 OSER1Q9NX31 292 aa13.77□□□□□ -0.21
USE1-207ENST00000596136 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.21
USE1-207ENST00000596136 MYOFQ9NZM1 2061 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 MYO16Q9Y6X6 1858 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 PRR23AA6NEV1 266 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 TLR5O60602 858 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 PAEPP09466 180 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 VDRP11473 427 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 PSEN1P49768 467 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms