RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 AVPR2P30518 371 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 SOX9P48436 509 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 KLK7P49862 253 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 STARD6P59095 220 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 YWHAEP62258 255 aaKnown RBP11.77□□□□□ -0.53
VRK3-210ENST00000596121 MYL5Q02045 173 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 FZD5Q13467 585 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 MLF2Q15773 248 aaPredicted RBP11.77□□□□□ -0.53
VRK3-210ENST00000596121 RAB41Q5JT25 222 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 TRIM68Q6AZZ1 485 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 LCLAT1Q6UWP7 414 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
VRK3-210ENST00000596121 ZNF687Q8N1G0 1237 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 SH3RF2Q8TEC5 729 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 OVCA2Q8WZ82 227 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 E2F7Q96AV8 911 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 CHFRQ96EP1 664 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
VRK3-210ENST00000596121 SLITRK1Q96PX8 696 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 FAM83CQ9BQN1 747 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 VPS16Q9H269 839 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 LINC00597Q9H2U6 94 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 PNPLA8Q9NP80 782 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 HPS4Q9NQG7 708 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 GKN1Q9NS71 199 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 GTSE1Q9NYZ3 720 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 APEX2Q9UBZ4 518 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 ZMYM5Q9UJ78 669 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 KIAA1257Q9ULG3 409 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 ARHGAP26Q9UNA1 814 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 SCML2Q9UQR0 700 aa11.77□□□□□ -0.53
VRK3-210ENST00000596121 MYH10P35580 1976 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 A0A1W2PQH9 124 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 FOXN3O00409 490 aaPredicted RBP11.76□□□□□ -0.53
VRK3-210ENST00000596121 SCAMP3O14828 347 aaKnown RBP11.76□□□□□ -0.53
VRK3-210ENST00000596121 CKMP06732 381 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 ATP1A3P13637 1013 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 GLULP15104 373 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 ARSAP15289 507 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 PPP3CCP48454 512 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 SLC7A9P82251 487 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 PFKPQ01813 784 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 USP4Q13107 963 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 CNGA2Q16280 664 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 ARHGAP44Q17R89 818 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
VRK3-210ENST00000596121 DENND1BQ6P3S1 775 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 TPRG1Q6ZUI0 275 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 BHLHA9Q7RTU4 235 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 YAF2Q8IY57 180 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 SLC35F5Q8WV83 523 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 SHC3Q92529 594 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 DNASE1L2Q92874 299 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 IRF7Q92985 503 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
VRK3-210ENST00000596121 NAA15Q9BXJ9 866 aaKnown RBP11.76□□□□□ -0.53
VRK3-210ENST00000596121 TRPV5Q9NQA5 729 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 SMPD4Q9NXE4 827 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 EHD2Q9NZN4 543 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 DLGAP2Q9P1A6 1054 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 LIMA1Q9UHB6 759 aaKnown RBP11.76□□□□□ -0.53
VRK3-210ENST00000596121 DNAJC12Q9UKB3 198 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 NUDT5Q9UKK9 219 aa11.76□□□□□ -0.53
VRK3-210ENST00000596121 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.76□□□□□ -0.53
VRK3-210ENST00000596121 KMT2EQ8IZD2 1858 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 KIF26AQ9ULI4 1882 aaPredicted RBP11.75□□□□□ -0.53
VRK3-210ENST00000596121 SYCE3A1L190 88 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 LRRC10BA6NIK2 292 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 LEFTY2O00292 366 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 XPO1O14980 1071 aaKnown RBP11.75□□□□□ -0.53
VRK3-210ENST00000596121 MDM4O15151 490 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 EPHB6O15197 1021 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 KRT5P13647 590 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 TCF3P15923 654 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 TRIM21P19474 475 aaKnown RBP11.75□□□□□ -0.53
VRK3-210ENST00000596121 AOC1P19801 751 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 PLA2G4AP47712 749 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 RGS7P49802 495 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 CLCN5P51795 746 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 TKTL1P51854 596 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
VRK3-210ENST00000596121 MFAP3P55082 362 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 PRKCQQ04759 706 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 MTF1Q14872 753 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 ARHGAP29Q52LW3 1261 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 HECTD3Q5T447 861 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 KLHDC7AQ5VTJ3 777 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 NAIF1Q69YI7 327 aaPredicted RBP11.75□□□□□ -0.53
VRK3-210ENST00000596121 PMF1Q6P1K2 205 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 TXNDC11Q6PKC3 985 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 CCDC186Q7Z3E2 898 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 TTC16Q8NEE8 873 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 PDZD8Q8NEN9 1154 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 LSM14BQ9BX40 385 aaKnown RBP11.75□□□□□ -0.53
VRK3-210ENST00000596121 MFSD1Q9H3U5 465 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 FBXO44Q9H4M3 255 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 EBF3Q9H4W6 596 aa11.75□□□□□ -0.53
VRK3-210ENST00000596121 CYTH4Q9UIA0 394 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms