RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CUL9Q8IWT3 2517 aa15.13■□□□□ 0.01
LIG1-208ENST00000595758 MYO10Q9HD67 2058 aa15.13■□□□□ 0.01
LIG1-208ENST00000595758 C2orf78A6NCI8 922 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 TPM3P06753 285 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 CFHP08603 1231 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 USP17L7P0C7H9 530 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 ZDHHC11BP0C7U3 371 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 CYP11B1P15538 503 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 PFKLP17858 780 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 HDCP19113 662 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 FCARP24071 287 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 GPD2P43304 727 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 RGS7P49802 495 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 PDE6CP51160 858 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 SNX30Q5VWJ9 437 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 PMF1Q6P1K2 205 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 CCDC186Q7Z3E2 898 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 SIX6OS1Q8N1H7 587 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 ARL14EPQ8N8R7 260 aaPredicted RBP15.12■□□□□ 0.01
LIG1-208ENST00000595758 E2F7Q96AV8 911 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 ELSPBP1Q96BH3 223 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 HSFY1Q96LI6 401 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 CYP2S1Q96SQ9 504 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 SMG9Q9H0W8 520 aaKnown RBP15.12■□□□□ 0.01
LIG1-208ENST00000595758 TLR8Q9NR97 1041 aaKnown RBP15.12■□□□□ 0.01
LIG1-208ENST00000595758 PCDHGC3Q9UN70 934 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 SORCS3Q9UPU3 1222 aa15.12■□□□□ 0.01
LIG1-208ENST00000595758 DPYSL4O14531 572 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 CBFA2T2O43439 604 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 DCXO43602 365 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 PRAMEF12O95522 483 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 ZBED1O96006 694 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 CKMP06732 381 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 LCP1P13796 627 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 PGFP49763 221 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 ADIGQ0VDE8 80 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 HECTD3Q5T447 861 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 PM20D1Q6GTS8 502 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 STK32AQ8WU08 396 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 KHSRPQ92945 711 aaKnown RBP eCLIP15.11■□□□□ 0.01
LIG1-208ENST00000595758 SLC22A12Q96S37 553 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 ANP32EQ9BTT0 268 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 PLA2G2FQ9BZM2 168 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 ULBP1Q9BZM6 244 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 XPO4Q9C0E2 1151 aaKnown RBP15.11■□□□□ 0.01
LIG1-208ENST00000595758 LHX5Q9H2C1 402 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 PDCL3Q9H2J4 239 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 TDP1Q9NUW8 608 aa15.11■□□□□ 0.01
LIG1-208ENST00000595758 ZNF638Q14966 1978 aaKnown RBP15.11■□□□□ 0.01
LIG1-208ENST00000595758 A0A1W2PQH9 124 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 HEPACAM2A8MVW5 462 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 GABBR2O75899 941 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 OAS1P00973 400 aaKnown RBP15.1■□□□□ 0.01
LIG1-208ENST00000595758 ALADP13716 330 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 PBX1P40424 430 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 PSEN1P49768 467 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 ARID5AQ03989 594 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 TAF3Q5VWG9 929 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 SCD5Q86SK9 330 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 NOP9Q86U38 636 aaKnown RBP15.1■□□□□ 0.01
LIG1-208ENST00000595758 PASD1Q8IV76 773 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 UBALD2Q8IYN6 164 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 ARHGAP18Q8N392 663 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 CELF5Q8N6W0 485 aaKnown RBP15.1■□□□□ 0.01
LIG1-208ENST00000595758 USP13Q92995 863 aaPredicted RBP15.1■□□□□ 0.01
LIG1-208ENST00000595758 RSPRY1Q96DX4 576 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 NUP58Q9BVL2 599 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 SLC4A5Q9BY07 1137 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 EDEM3Q9BZQ6 932 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 RNF38Q9H0F5 515 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 RBSNQ9H1K0 784 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 NMUR1Q9HB89 426 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 CNGB3Q9NQW8 809 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 ST7Q9NRC1 585 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 OBP2AQ9NY56 170 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 NAGPAQ9UK23 515 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 MYO6Q9UM54 1294 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 CEP83Q9Y592 693 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 PATJQ8NI35 1801 aa15.1■□□□□ 0.01
LIG1-208ENST00000595758 PIK3R2O00459 728 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 DLL1O00548 723 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 COCHO43405 550 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 FBXO21O94952 628 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 CCDC172P0C7W6 258 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 PSMC3P17980 439 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 ACADSBP45954 432 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 RPL34P49207 117 aaKnown RBP15.09■□□□□ 0.01
LIG1-208ENST00000595758 TUBP50607 506 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 ZXDAP98168 799 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 ZNF268Q14587 947 aaPredicted RBP15.09■□□□□ 0.01
LIG1-208ENST00000595758 FIGNQ5HY92 759 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 VITQ6UXI7 678 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 ZNF677Q86XU0 584 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 MFSD6LQ8IWD5 586 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 WDTC1Q8N5D0 677 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 EPS8L1Q8TE68 723 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 DEPDC1BQ8WUY9 529 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 DDX1Q92499 740 aaKnown RBP15.09■□□□□ 0.01
LIG1-208ENST00000595758 BAP1Q92560 729 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms