RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MRFAP1Q9Y605 127 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 TTC28Q96AY4 2481 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 ASGR2P07307 311 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 YWHAQP27348 245 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 CASQ1P31415 396 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 USP8P40818 1118 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 SLC5A3P53794 718 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 CYP4F8P98187 520 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 IFRD2Q12894 506 aaPredicted RBP20.69■□□□□ 0.9
LSM4-203ENST00000593829 HTR4Q13639 388 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 STILQ15468 1287 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 GOLGA7BQ2TAP0 167 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 GPR158Q5T848 1215 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 TFAP2BQ92481 460 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 MRPS31Q92665 395 aaKnown RBP20.69■□□□□ 0.9
LSM4-203ENST00000593829 PNPLA8Q9NP80 782 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 COMMD8Q9NX08 183 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 MUTYHQ9UIF7 546 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 ZMYM5Q9UJ78 669 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 AJAP1Q9UKB5 411 aaPredicted RBP20.69■□□□□ 0.9
LSM4-203ENST00000593829 TSPAN16Q9UKR8 245 aa20.69■□□□□ 0.9
LSM4-203ENST00000593829 O00370 1275 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 STXBP5Q5T5C0 1151 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 PARM1Q6UWI2 310 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 SLITRK1Q96PX8 696 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 TASP1Q9H6P5 420 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 TULP2O00295 520 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 DLL1O00548 723 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 UCHL3P15374 230 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 DDX6P26196 483 aaKnown RBP eCLIP20.68■□□□□ 0.9
LSM4-203ENST00000593829 CNGA2Q16280 664 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 PTPN21Q16825 1174 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 FILIP1LQ4L180 1135 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 FAM78AQ5JUQ0 283 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 SPECC1LQ69YQ0 1117 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 CC2D1AQ6P1N0 951 aaPredicted RBP20.68■□□□□ 0.9
LSM4-203ENST00000593829 LCLAT1Q6UWP7 414 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 SCAMP5Q8TAC9 235 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 ZSCAN18Q8TBC5 510 aaPredicted RBP20.68■□□□□ 0.9
LSM4-203ENST00000593829 FGF14Q92915 247 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 SMARCD2Q92925 531 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 ASB16Q96NS5 453 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 IL37Q9NZH6 218 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 TRPM5Q9NZQ8 1165 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 SIK3Q9Y2K2 1263 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 NUMBLQ9Y6R0 609 aa20.68■□□□□ 0.9
LSM4-203ENST00000593829 BDP1A6H8Y1 2624 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 SOBPA7XYQ1 873 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 HHLA1C9JL84 531 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 BRD2P25440 801 aaKnown RBP20.67■□□□□ 0.9
LSM4-203ENST00000593829 PPP3CCP48454 512 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 KLK7P49862 253 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 BCAT1P54687 386 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 SLC20A2Q08357 652 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 TAF10Q12962 218 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 RAPGEF1Q13905 1077 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 TTC30AQ86WT1 665 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 TC2NQ8N9U0 490 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 RSAD2Q8WXG1 361 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 FBXO32Q969P5 355 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 PCMTD1Q96MG8 357 aaPredicted RBP20.67■□□□□ 0.9
LSM4-203ENST00000593829 ERGIC2Q96RQ1 377 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 ZSWIM1Q9BR11 485 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 FBXO44Q9H4M3 255 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 FAM207AQ9NSI2 230 aaPredicted RBP20.67■□□□□ 0.9
LSM4-203ENST00000593829 SORCS3Q9UPU3 1222 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 NCOR1O75376 2440 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 GREB1Q4ZG55 1949 aa20.67■□□□□ 0.9
LSM4-203ENST00000593829 CALCAP01258 141 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 BST2Q10589 180 aaKnown RBP20.66■□□□□ 0.9
LSM4-203ENST00000593829 TXLNBQ8N3L3 684 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 ST13P5Q8NFI4 369 aaPredicted RBP20.66■□□□□ 0.9
LSM4-203ENST00000593829 NAA15Q9BXJ9 866 aaKnown RBP20.66■□□□□ 0.9
LSM4-203ENST00000593829 SLC46A2Q9BY10 475 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.66■□□□□ 0.9
LSM4-203ENST00000593829 DAAM1Q9Y4D1 1078 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 FOXN3O00409 490 aaPredicted RBP20.66■□□□□ 0.9
LSM4-203ENST00000593829 DCXO43602 365 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 TUBB4BP68371 445 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 TDGQ13569 410 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 DRAP1Q14919 205 aaPredicted RBP20.66■□□□□ 0.9
LSM4-203ENST00000593829 TXNDC8Q6A555 127 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 MON1AQ86VX9 555 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 MAB21L3Q8N8X9 362 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 PDZD8Q8NEN9 1154 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 OVCA2Q8WZ82 227 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 KHSRPQ92945 711 aaKnown RBP eCLIP20.66■□□□□ 0.9
LSM4-203ENST00000593829 STK33Q9BYT3 514 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 GANQ9H2C0 597 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 TRPV4Q9HBA0 871 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 ZFP14Q9HCL3 533 aa20.66■□□□□ 0.9
LSM4-203ENST00000593829 FAM92AA1XBS5 289 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 MED7O43513 233 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 SETSIPP0DME0 302 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 ALADP13716 330 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 WEE1P30291 646 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 GNA15P30679 374 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 PDE4CQ08493 712 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 TUBB2AQ13885 445 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 TANGO2Q6ICL3 276 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms