RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 SCAMP3O14828 347 aaKnown RBP25.39■■□□□ 1.66
LSM4-202ENST00000593564 KLRC4O43908 158 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 KCNA4P22459 653 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 GBP1P32455 592 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 SLC6A11P48066 632 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 CREB5Q02930 508 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 CRY1Q16526 586 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 SNX30Q5VWJ9 437 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 PMS2CLQ68D20 193 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 TCEAL6Q6IPX3 200 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 ANO7Q6IWH7 933 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 PAQR9Q6ZVX9 377 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 SLC9A9Q8IVB4 645 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 GRAMD1CQ8IYS0 662 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 TCEAL3Q969E4 200 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 SMARCD1Q96GM5 515 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 ZFRQ96KR1 1074 aaKnown RBP25.39■■□□□ 1.66
LSM4-202ENST00000593564 TPSD1Q9BZJ3 242 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 DMAP1Q9NPF5 467 aaPredicted RBP25.39■■□□□ 1.66
LSM4-202ENST00000593564 IL37Q9NZH6 218 aa25.39■■□□□ 1.66
LSM4-202ENST00000593564 A0A0A0MRY4 1105 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 TNFRSF10BO14763 440 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 COCHO43405 550 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 KAT7O95251 611 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 CAVIN2O95810 425 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 C4BPAP04003 597 aaKnown RBP25.38■■□□□ 1.65
LSM4-202ENST00000593564 SLFN14P0C7P3 912 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 CHRM1P11229 460 aaPredicted RBP25.38■■□□□ 1.65
LSM4-202ENST00000593564 ADH5P11766 374 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 TUBP50607 506 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 SLC5A3P53794 718 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 STK4Q13043 487 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 HSF5Q4G112 596 aaPredicted RBP25.38■■□□□ 1.65
LSM4-202ENST00000593564 HECTD3Q5T447 861 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 C12orf40Q86WS4 652 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 CCDC33Q8N5R6 958 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 KIAA0895Q8NCT3 520 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 MDGA1Q8NFP4 955 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 SCAMP5Q8TAC9 235 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 OTUB2Q96DC9 234 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 MED10Q9BTT4 135 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 SDCBP2Q9H190 292 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 COMMD8Q9NX08 183 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 SERTAD1Q9UHV2 236 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 INVSQ9Y283 1065 aa25.38■■□□□ 1.65
LSM4-202ENST00000593564 MAP1BP46821 2468 aaKnown RBP25.37■■□□□ 1.65
LSM4-202ENST00000593564 CLSTN1O94985 981 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 VNN1O95497 513 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 APODP05090 189 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 MESP2Q0VG99 397 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 RNF43Q68DV7 783 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 SCARA5Q6ZMJ2 495 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 SFTPA1Q8IWL2 248 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 FUKQ8N0W3 1084 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 DUSP9Q99956 384 aaKnown RBP25.37■■□□□ 1.65
LSM4-202ENST00000593564 LSM14BQ9BX40 385 aaKnown RBP25.37■■□□□ 1.65
LSM4-202ENST00000593564 CHORDC1Q9UHD1 332 aaPredicted RBP25.37■■□□□ 1.65
LSM4-202ENST00000593564 CFAP45Q9UL16 551 aa25.37■■□□□ 1.65
LSM4-202ENST00000593564 FAM92AA1XBS5 289 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.36■■□□□ 1.65
LSM4-202ENST00000593564 ACTN4O43707 911 aaKnown RBP25.36■■□□□ 1.65
LSM4-202ENST00000593564 ALDH1A2O94788 518 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 ZDHHC11BP0C7U3 371 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 P4HA1P13674 534 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 GRIA2P42262 883 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 TMEM92Q6UXU6 159 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 HSCBQ8IWL3 235 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 ALLCQ8N6M5 410 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 IL17RCQ8NAC3 791 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 PAGE5Q96GU1 130 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 EDEM2Q9BV94 578 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 ARHGEF4Q9NR80 690 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 KRT82Q9NSB4 513 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 EXOC1Q9NV70 894 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 RCOR1Q9UKL0 485 aa25.36■■□□□ 1.65
LSM4-202ENST00000593564 AP1G2O75843 785 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 KLF8O95600 359 aaPredicted RBP25.35■■□□□ 1.65
LSM4-202ENST00000593564 RPN1P04843 607 aaKnown RBP25.35■■□□□ 1.65
LSM4-202ENST00000593564 HNRNPLP14866 589 aaKnown RBP eCLIP25.35■■□□□ 1.65
LSM4-202ENST00000593564 SGSM1Q2NKQ1 1148 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 LY6G5CQ5SRR4 150 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 N4BP2L1Q5TBK1 243 aaPredicted RBP25.35■■□□□ 1.65
LSM4-202ENST00000593564 ACOT1Q86TX2 421 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 ABCA7Q8IZY2 2146 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 TXNDC5Q8NBS9 432 aaKnown RBP25.35■■□□□ 1.65
LSM4-202ENST00000593564 OLIG1Q8TAK6 271 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 ELMO3Q96BJ8 720 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 KCTD10Q9H3F6 313 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 CCSER2Q9H7U1 834 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 GMIPQ9P107 970 aa25.35■■□□□ 1.65
LSM4-202ENST00000593564 SGK1O00141 431 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 HSP90AA1P07900 732 aaKnown RBP25.34■■□□□ 1.65
LSM4-202ENST00000593564 BCKDHBP21953 392 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 PMLP29590 882 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 TIE1P35590 1138 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 TNFRSF4P43489 277 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 KIR2DL1P43626 348 aaPredicted RBP25.34■■□□□ 1.65
LSM4-202ENST00000593564 DLG4P78352 724 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 DNM1Q05193 864 aaKnown RBP25.34■■□□□ 1.65
LSM4-202ENST00000593564 GAD2Q05329 585 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms