RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 IMPG1Q17R60 797 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 TBC1D19Q8N5T2 526 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 PAFAH2Q99487 392 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 PDP2Q9P2J9 529 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 SYCE1LA8MT33 242 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 ABCE1P61221 599 aaKnown RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 OTUD4Q01804 1114 aaKnown RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 CXCL17Q6UXB2 119 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 MCOLN2Q8IZK6 566 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 MRIQ9BWK5 157 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 C20orf96Q9NUD7 363 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 FRMPD4Q14CM0 1322 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 MAGEA13PA6NCF6 341 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 MTM1Q13496 603 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 COL9A3Q14050 684 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 COBLL1Q53SF7 1204 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 CDC26Q8NHZ8 85 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 ULK4Q96C45 1275 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 PPP1R36Q96LQ0 422 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 POP1Q99575 1024 aaKnown RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 GLRA3O75311 464 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 SLITRK3O94933 977 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 CALB2P22676 271 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 CDH18Q13634 790 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 RCN1Q15293 331 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 GRIK4Q16099 956 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 SUGP1Q8IWZ8 645 aaKnown RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 TMA16Q96EY4 203 aaKnown RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 DCLRE1BQ9H816 532 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 FAM49BQ9NUQ9 324 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 EVA1BQ9NVM1 165 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 DLGAP2Q9P1A6 1054 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 AIM2O14862 343 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 PGK1P00558 417 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 HNRNPH3P31942 346 aaKnown RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 CPA2P48052 419 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 SLC11A2P49281 568 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 KCNK18Q7Z418 384 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 YTHDF3Q7Z739 585 aaKnown RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ATPAF2Q8N5M1 289 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 TFB1MQ8WVM0 346 aaKnown RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 APBB2Q92870 758 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ARHGEF38Q9NXL2 777 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 KIAA1257Q9ULG3 409 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 FAM86B1E9PN63 330 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 KDM1AO60341 852 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 FAM86B2P0C5J1 330 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 KPNB1Q14974 876 aaKnown RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 IL17AQ16552 155 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ANO4Q32M45 955 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ANKRD23Q86SG2 305 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 CHSY1Q86X52 802 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ABRAQ8N0Z2 381 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 SLC5A5Q92911 643 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 FAM163AQ96GL9 167 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ELMO2Q96JJ3 720 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 PDCD2LQ9BRP1 358 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 DCDC2Q9UHG0 476 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 TRPV2Q9Y5S1 764 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ENO4A6NNW6 628 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 APOA4P06727 396 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 PTPN4P29074 926 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 HDAC4P56524 1084 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 CYTH1Q15438 398 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 THEMIS2Q5TEJ8 643 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 PACS2Q86VP3 889 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ARHGEF19Q8IW93 802 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 EME1Q96AY2 570 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 CENPTQ96BT3 561 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 OSMRQ99650 979 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 SHOC2Q9UQ13 582 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 AURKCQ9UQB9 309 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 UBA6A0AVT1 1052 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 ITGB3P05106 788 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 PYGMP11217 842 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 DSG1Q02413 1049 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 EIF2B5Q13144 721 aaKnown RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 RBBP7Q16576 425 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 GJC2Q5T442 439 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 OLA1Q9NTK5 396 aaKnown RBP13.17□□□□□ -0.3
DNMT1-228ENST00000592705 SLIT3O75094 1523 aa13.17□□□□□ -0.3
DNMT1-228ENST00000592705 GNRH1P01148 92 aa13.16□□□□□ -0.3
DNMT1-228ENST00000592705 VDRP11473 427 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms