RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 DUSP16Q9BY84 665 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 CHRDQ9H2X0 955 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 SPATA6Q9NWH7 488 aaPredicted RBP28.79■■■□□ 2.2
SMAD4-213ENST00000591914 DUS2Q9NX74 493 aaKnown RBP28.79■■■□□ 2.2
SMAD4-213ENST00000591914 GMIPQ9P107 970 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 CACNA1IQ9P0X4 2223 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 LEFTY2O00292 366 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 CCDC192P0DO97 292 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 NBL1P41271 181 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 YWHAEP62258 255 aaKnown RBP28.78■■■□□ 2.2
SMAD4-213ENST00000591914 CETN1Q12798 172 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 KCNH2Q12809 1159 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 ARHGAP17Q68EM7 881 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 KIAA1958Q8N8K9 716 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 TTC16Q8NEE8 873 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 NUP62CLQ9H1M0 184 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 LMAN1LQ9HAT1 526 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.78■■■□□ 2.2
SMAD4-213ENST00000591914 CPQQ9Y646 472 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 WNT6Q9Y6F9 365 aa28.78■■■□□ 2.2
SMAD4-213ENST00000591914 DMDP11532 3685 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 PROB1E7EW31 1015 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 MRE11P49959 708 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 HECTD3Q5T447 861 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 ATP2A3Q93084 1043 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 CHFRQ96EP1 664 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 NT5C1BQ96P26 610 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 IER2Q9BTL4 223 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 SCML2Q9UQR0 700 aa28.77■■■□□ 2.2
SMAD4-213ENST00000591914 COCHO43405 550 aa28.76■■■□□ 2.19
SMAD4-213ENST00000591914 AFPP02771 609 aaKnown RBP28.76■■■□□ 2.19
SMAD4-213ENST00000591914 IFNAR2P48551 515 aa28.76■■■□□ 2.19
SMAD4-213ENST00000591914 EML3Q32P44 896 aa28.76■■■□□ 2.19
SMAD4-213ENST00000591914 ALYREFQ86V81 257 aaKnown RBP28.76■■■□□ 2.19
SMAD4-213ENST00000591914 JAKMIP2Q96AA8 810 aa28.76■■■□□ 2.19
SMAD4-213ENST00000591914 GBP4Q96PP9 640 aa28.76■■■□□ 2.19
SMAD4-213ENST00000591914 SMPD4Q9NXE4 827 aa28.76■■■□□ 2.19
SMAD4-213ENST00000591914 USP34Q70CQ2 3546 aa28.76■■■□□ 2.19
SMAD4-213ENST00000591914 MYO16Q9Y6X6 1858 aa28.76■■■□□ 2.19
SMAD4-213ENST00000591914 LAMTOR5O43504 91 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 ACO1P21399 889 aaKnown RBP28.75■■■□□ 2.19
SMAD4-213ENST00000591914 PGFP49763 221 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 MTAPQ13126 283 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 PON2Q15165 354 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 MAMSTRQ6ZN01 415 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 CPA6Q8N4T0 437 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 IPO9Q96P70 1041 aaKnown RBP28.75■■■□□ 2.19
SMAD4-213ENST00000591914 CCSER2Q9H7U1 834 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 ECT2Q9H8V3 914 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 TLR8Q9NR97 1041 aaKnown RBP28.75■■■□□ 2.19
SMAD4-213ENST00000591914 FBXO4Q9UKT5 387 aa28.75■■■□□ 2.19
SMAD4-213ENST00000591914 SP9P0CG40 484 aa28.74■■■□□ 2.19
SMAD4-213ENST00000591914 MBL2P11226 248 aaPredicted RBP28.74■■■□□ 2.19
SMAD4-213ENST00000591914 KIF11P52732 1056 aa28.74■■■□□ 2.19
SMAD4-213ENST00000591914 LRRC32Q14392 662 aa28.74■■■□□ 2.19
SMAD4-213ENST00000591914 DDX42Q86XP3 938 aaKnown RBP eCLIP28.74■■■□□ 2.19
SMAD4-213ENST00000591914 ANKRD52Q8NB46 1076 aa28.74■■■□□ 2.19
SMAD4-213ENST00000591914 EHBP1Q8NDI1 1231 aa28.74■■■□□ 2.19
SMAD4-213ENST00000591914 ZFRQ96KR1 1074 aaKnown RBP28.74■■■□□ 2.19
SMAD4-213ENST00000591914 CNOT6LQ96LI5 555 aaKnown RBP28.74■■■□□ 2.19
SMAD4-213ENST00000591914 UBXN6Q9BZV1 441 aa28.74■■■□□ 2.19
SMAD4-213ENST00000591914 LINC00597Q9H2U6 94 aa28.74■■■□□ 2.19
SMAD4-213ENST00000591914 CYP26A1O43174 497 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 AMPD2Q01433 879 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 CCINQ13939 588 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 ZNF528Q3MIS6 628 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 DPCR1Q3MIW9 517 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 DGKKQ5KSL6 1271 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 IRF2BP1Q8IU81 584 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 PPM1KQ8N3J5 372 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 PRMT8Q9NR22 394 aaPredicted RBP28.73■■■□□ 2.19
SMAD4-213ENST00000591914 CFAP97Q9P2B7 532 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 USP3Q9Y6I4 520 aa28.73■■■□□ 2.19
SMAD4-213ENST00000591914 TRDMT1O14717 391 aaKnown RBP28.72■■■□□ 2.19
SMAD4-213ENST00000591914 TLR5O60602 858 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 GJA4P35212 333 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 GCNT1Q02742 428 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 SGO2Q562F6 1265 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 TMEM196Q5HYL7 178 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 CCDC186Q7Z3E2 898 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 TTC30AQ86WT1 665 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 KAT5Q92993 513 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 CYLDQ9NQC7 956 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 RBM12Q9NTZ6 932 aaKnown RBP28.72■■■□□ 2.19
SMAD4-213ENST00000591914 OSER1Q9NX31 292 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 KIAA1257Q9ULG3 409 aa28.72■■■□□ 2.19
SMAD4-213ENST00000591914 GAS6Q14393 721 aa28.71■■■□□ 2.19
SMAD4-213ENST00000591914 ARHGEF19Q8IW93 802 aa28.71■■■□□ 2.19
SMAD4-213ENST00000591914 INTS2Q9H0H0 1204 aaKnown RBP28.71■■■□□ 2.19
SMAD4-213ENST00000591914 NFATC1O95644 943 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 PAEPP09466 180 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 VDRP11473 427 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 GOLGA7BQ2TAP0 167 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 RAB41Q5JT25 222 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 TMEM270Q6UE05 265 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 PIGZQ86VD9 579 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 SYNPOQ8N3V7 929 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 GPT2Q8TD30 523 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 NMUR1Q9HB89 426 aa28.7■■■□□ 2.18
SMAD4-213ENST00000591914 TSPAN16Q9UKR8 245 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms