RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 PTCH2Q9Y6C5 1203 aa27.26■■□□□ 1.95
RUNDC3A-206ENST00000590941 SMAPO00193 183 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 DNALI1O14645 258 aaPredicted RBP27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 MCF2LO15068 1137 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 INPPL1O15357 1258 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 ARSEP51690 589 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 CLCNKBP51801 687 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 UPP1Q16831 310 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 C15orf59Q2T9L4 293 aaPredicted RBP27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 KDM7AQ6ZMT4 941 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 METTL23Q86XA0 190 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 ACTL9Q8TC94 416 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 CENPIQ92674 756 aaPredicted RBP27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 LPPQ93052 612 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 ADAM2Q99965 735 aa27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 STMN4Q9H169 189 aaPredicted RBP27.25■■□□□ 1.95
RUNDC3A-206ENST00000590941 MEIS3P2A8K0S8 358 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 RIPK2O43353 540 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 TRPA1O75762 1119 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 GRAP2O75791 330 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 FAM200BP0CF97 657 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 OTUD4Q01804 1114 aaKnown RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 CDO1Q16878 200 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 KRT71Q3SY84 523 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 HIBCHQ6NVY1 386 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 PIGZQ86VD9 579 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 ZBTB9Q96C00 473 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 PEBP4Q96S96 227 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 SYT15Q9BQS2 421 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 ZNF670Q9BS34 389 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 MED10Q9BTT4 135 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 C11orf84Q9BUA3 381 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 DDX23Q9BUQ8 820 aaKnown RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 PRDM16Q9HAZ2 1276 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 HMX1Q9NP08 348 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 HCRTO43612 131 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 FBXO21O94952 628 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 LCP1P13796 627 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 TUSC3Q13454 348 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 MORF4L2Q15014 288 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 TRIP13Q15645 432 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 CYP4V2Q6ZWL3 525 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 ROPN1BQ9BZX4 212 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 PHACTR1Q9C0D0 580 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 EPB41L4BQ9H329 900 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 ROPN1Q9HAT0 212 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 LRRC4Q9HBW1 653 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 TRMT13Q9NUP7 481 aaKnown RBP27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 MIOSQ9NXC5 875 aa27.24■■□□□ 1.95
RUNDC3A-206ENST00000590941 SGK1O00141 431 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 TP73O15350 636 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 DAB1O75553 588 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 GABBR2O75899 941 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 CAPN2P17655 700 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 NR1D1P20393 614 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 TGM2P21980 687 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 ATP11AP98196 1134 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 DPYSL3Q14195 570 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 P3H1Q32P28 736 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 SLC43A3Q8NBI5 491 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 FAM118BQ9BPY3 351 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 TPX2Q9ULW0 747 aaKnown RBP27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 SHOC2Q9UQ13 582 aa27.23■■□□□ 1.95
RUNDC3A-206ENST00000590941 MGEA5O60502 916 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 SHOX2O60902 331 aaPredicted RBP27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 EOMESO95936 686 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 CYP11A1P05108 521 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 TKTP29401 623 aaKnown RBP27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 APLP1P51693 650 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 C6orf118Q5T5N4 469 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 SCYL2Q6P3W7 929 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 LEKR1Q6ZMV7 388 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 CCDC25Q86WR0 208 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 ECHDC2Q86YB7 292 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 PSTKQ8IV42 348 aaKnown RBP27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 ZCCHC9Q8N567 271 aaKnown RBP27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 RNF157Q96PX1 679 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 B3GNT5Q9BYG0 378 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 SEMA4AQ9H3S1 761 aa27.22■■□□□ 1.95
RUNDC3A-206ENST00000590941 ZFXP17010 805 aaPredicted RBP27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 MATKP42679 507 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 CDR1P51861 262 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 DYNLT1P63172 113 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 SLC29A2Q14542 456 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 MDH1BQ5I0G3 518 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 SIX6OS1Q8N1H7 587 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 OR2W6PQ8NHA6 318 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 RSAD2Q8WXG1 361 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 PGM2Q96G03 612 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 LPIN3Q9BQK8 851 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 STAP1Q9ULZ2 295 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 CFAP69A5D8W1 941 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 INHAP05111 366 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 CKBP12277 381 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 STIP1P31948 543 aaKnown RBP27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 VPS41P49754 854 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 HDAC4P56524 1084 aa27.21■■□□□ 1.95
RUNDC3A-206ENST00000590941 MRPS5P82675 430 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms