RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SLC41A1Q8IVJ1 513 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 HSCBQ8IWL3 235 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 KBTBD7Q8WVZ9 684 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 SAAL1Q96ER3 474 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 CEP295NLQ96MC4 621 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 SYT15Q9BQS2 421 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 STRA6Q9BX79 667 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 CRTAC1Q9NQ79 661 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 ITGA11Q9UKX5 1188 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 SH3BP5O60239 455 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 GJB3O75712 270 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 ADH1CP00326 375 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 OAS1P00973 400 aaKnown RBP18.48■□□□□ 0.55
RETREG3-210ENST00000590541 KRT19P08727 400 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 NASPP49321 788 aaPredicted RBP18.48■□□□□ 0.55
RETREG3-210ENST00000590541 TRIP6Q15654 476 aaKnown RBP18.48■□□□□ 0.55
RETREG3-210ENST00000590541 SLC36A4Q6YBV0 504 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 LIMS2Q7Z4I7 341 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 RABEPKQ7Z6M1 372 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 CACTINQ8WUQ7 758 aaKnown RBP18.48■□□□□ 0.55
RETREG3-210ENST00000590541 ADAMTS14Q8WXS8 1223 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 HVCN1Q96D96 273 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 ZNF396Q96N95 335 aaPredicted RBP18.48■□□□□ 0.55
RETREG3-210ENST00000590541 CALCOCO1Q9P1Z2 691 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 CFAP97Q9P2B7 532 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 SEL1LQ9UBV2 794 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 HCN2Q9UL51 889 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 MYOFQ9NZM1 2061 aa18.48■□□□□ 0.55
RETREG3-210ENST00000590541 IGHV1OR15-9A0A0B4J2B8 117 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.47■□□□□ 0.55
RETREG3-210ENST00000590541 HSP90AA1P07900 732 aaKnown RBP18.47■□□□□ 0.55
RETREG3-210ENST00000590541 FTH1P19P0C7X4 201 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 PPP3CCP48454 512 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 RBP5P82980 135 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 CEBPZQ03701 1054 aaKnown RBP18.47■□□□□ 0.55
RETREG3-210ENST00000590541 SLC14A1Q13336 389 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 LY6G5CQ5SRR4 150 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 FAM173BQ6P4H8 233 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 CCNI2Q6ZMN8 369 aaPredicted RBP18.47■□□□□ 0.55
RETREG3-210ENST00000590541 SV2BQ7L1I2 683 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 DPH6Q7L8W6 267 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 SFR1Q86XK3 245 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 ETFBKMTQ8IXQ9 262 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 PNPLA1Q8N8W4 532 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 USP28Q96RU2 1077 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 MTMR12Q9C0I1 747 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 RBAKQ9NYW8 714 aaPredicted RBP18.47■□□□□ 0.55
RETREG3-210ENST00000590541 CDH9Q9ULB4 789 aa18.47■□□□□ 0.55
RETREG3-210ENST00000590541 A0A1W2PQD8 194 aa18.46■□□□□ 0.55
RETREG3-210ENST00000590541 SYPP08247 313 aa18.46■□□□□ 0.55
RETREG3-210ENST00000590541 ANXA13P27216 316 aa18.46■□□□□ 0.55
RETREG3-210ENST00000590541 NOP14P78316 857 aaKnown RBP18.46■□□□□ 0.55
RETREG3-210ENST00000590541 USP49Q70CQ1 688 aa18.46■□□□□ 0.55
RETREG3-210ENST00000590541 ZNF513Q8N8E2 541 aaPredicted RBP18.46■□□□□ 0.55
RETREG3-210ENST00000590541 KCNV2Q8TDN2 545 aa18.46■□□□□ 0.55
RETREG3-210ENST00000590541 PCED1BQ96HM7 432 aa18.46■□□□□ 0.55
RETREG3-210ENST00000590541 CLIC6Q96NY7 704 aa18.46■□□□□ 0.55
RETREG3-210ENST00000590541 BBC3Q96PG8 261 aaPredicted RBP18.46■□□□□ 0.55
RETREG3-210ENST00000590541 CCDC86Q9H6F5 360 aaKnown RBP18.46■□□□□ 0.55
RETREG3-210ENST00000590541 PLXNB3Q9ULL4 1909 aa18.46■□□□□ 0.55
RETREG3-210ENST00000590541 A0A1W2PQF6 199 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 TBC1D3BA6NDS4 549 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 F8VP50 259 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 TRIM66O15016 1216 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 PPP6R2O75170 966 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 LDHAP00338 332 aaKnown RBP18.45■□□□□ 0.54
RETREG3-210ENST00000590541 ABL1P00519 1130 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 HOXB2P14652 356 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 GAP43P17677 238 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 CYP27A1Q02318 531 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 GAD2Q05329 585 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 TAF10Q12962 218 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 STK38Q15208 465 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 MAPRE1Q15691 268 aaKnown RBP18.45■□□□□ 0.54
RETREG3-210ENST00000590541 MIB1Q86YT6 1006 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 NAT16Q8N8M0 369 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 TRIML1Q8N9V2 468 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 LINC00301Q8NCQ3 95 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 MDM1Q8TC05 714 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 HSPA12BQ96MM6 686 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 PDE11AQ9HCR9 933 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 CD248Q9HCU0 757 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 EHD2Q9NZN4 543 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 TBC1D14Q9P2M4 693 aa18.45■□□□□ 0.54
RETREG3-210ENST00000590541 MYO18AQ92614 2054 aaKnown RBP18.45■□□□□ 0.54
RETREG3-210ENST00000590541 GOLGA8IPA6NC78 632 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 GOLGA8JA6NMD2 632 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 TULP3O75386 442 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 YEATS4O95619 227 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 PDGFRBP09619 1106 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 MBL2P11226 248 aaPredicted RBP18.44■□□□□ 0.54
RETREG3-210ENST00000590541 WASP42768 502 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 L1TD1Q5T7N2 865 aaKnown RBP18.44■□□□□ 0.54
RETREG3-210ENST00000590541 ATL3Q6DD88 541 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 DYMQ7RTS9 669 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 TRMT11Q7Z4G4 463 aaKnown RBP18.44■□□□□ 0.54
RETREG3-210ENST00000590541 DDX42Q86XP3 938 aaKnown RBP eCLIP18.44■□□□□ 0.54
RETREG3-210ENST00000590541 NAXDQ8IW45 347 aa18.44■□□□□ 0.54
RETREG3-210ENST00000590541 MYCBPAPQ8TBZ2 947 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms