RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 APOL6Q9BWW8 343 aa16.42■□□□□ 0.22
MBD1-222ENST00000590208 HBS1LQ9Y450 684 aaKnown RBP16.42■□□□□ 0.22
MBD1-222ENST00000590208 PPME1Q9Y570 386 aa16.42■□□□□ 0.22
MBD1-222ENST00000590208 SIPA1L1O43166 1804 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 CAPN8A6NHC0 703 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 IMPDH2P12268 514 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 MMP8P22894 467 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 FOLH1Q04609 750 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 CYP4A22Q5TCH4 519 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 AAGABQ6PD74 315 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 HHIPL2Q6UWX4 724 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 C15orf39Q6ZRI6 1047 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 CRLF3Q8IUI8 442 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 ZNF536O15090 1300 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 MYOCOSA0A1B0GUC4 107 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 SMIM31A0A1B0GVY4 71 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 C3orf70A6NLC5 250 aaPredicted RBP16.41■□□□□ 0.22
MBD1-222ENST00000590208 VNN1O95497 513 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 PROCP04070 461 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 SERPINA6P08185 405 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 RAG1P15918 1043 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 ACOT2P49753 483 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 DMP1Q13316 513 aaPredicted RBP16.41■□□□□ 0.22
MBD1-222ENST00000590208 CUL2Q13617 745 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 DNAJC24Q6P3W2 148 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 PAOXQ6QHF9 649 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 DGCR14Q96DF8 476 aaKnown RBP16.41■□□□□ 0.22
MBD1-222ENST00000590208 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 COL20A1Q9P218 1284 aa16.41■□□□□ 0.22
MBD1-222ENST00000590208 SDR42E2A6NKP2 422 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 LYPLA1O75608 230 aaPredicted RBP16.4■□□□□ 0.22
MBD1-222ENST00000590208 TFAP2AP05549 437 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 PIM1P11309 404 aaPredicted RBP16.4■□□□□ 0.22
MBD1-222ENST00000590208 IL1R2P27930 398 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 TLR1Q15399 786 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 ANKRD20A4Q4UJ75 823 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 METTL25Q8N6Q8 603 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 ZNF606Q8WXB4 792 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 PLEKHG4BQ96PX9 1271 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 TRIM56Q9BRZ2 755 aaKnown RBP16.4■□□□□ 0.22
MBD1-222ENST00000590208 C1orf21Q9H246 121 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 USP29Q9HBJ7 922 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 SIRPGQ9P1W8 387 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 PACSIN3Q9UKS6 424 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 ZC3H11AO75152 810 aaKnown RBP eCLIP16.4■□□□□ 0.22
MBD1-222ENST00000590208 ZNF394Q53GI3 561 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 RABGAP1LQ5R372 815 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 ATG16L1Q676U5 607 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 TRIM72Q6ZMU5 477 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 USP37Q86T82 979 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 HPS6Q86YV9 775 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 PRICKLE1Q96MT3 831 aaPredicted RBP16.4■□□□□ 0.22
MBD1-222ENST00000590208 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 ZC3H12CQ9C0D7 883 aaKnown RBP16.4■□□□□ 0.22
MBD1-222ENST00000590208 FBXO28Q9NVF7 368 aa16.4■□□□□ 0.22
MBD1-222ENST00000590208 ATP9BO43861 1147 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 BBOX1O75936 387 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 TMCC1O94876 653 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 ATP6V1B1P15313 513 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 ZACNQ401N2 412 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 LRRC38Q5VT99 294 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 TTC39BQ5VTQ0 682 aaPredicted RBP16.39■□□□□ 0.21
MBD1-222ENST00000590208 KLHDC10Q6PID8 442 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 TMC7Q7Z402 723 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 TEX264Q9Y6I9 313 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 RFPL1O75677 317 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 ZMPSTE24O75844 475 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 APBA3O96018 575 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 RGS2P41220 211 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 HPCAP84074 193 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 TBL3Q12788 808 aaKnown RBP16.39■□□□□ 0.21
MBD1-222ENST00000590208 DPYSL3Q14195 570 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 GK3PQ14409 553 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 NADK2Q4G0N4 442 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 SLC26A11Q86WA9 606 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 RBM12BQ8IXT5 1001 aaKnown RBP16.39■□□□□ 0.21
MBD1-222ENST00000590208 UBAP1Q9NZ09 502 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 INPP5FQ9Y2H2 1132 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 NUB1Q9Y5A7 615 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 LOC100653049A0A140TA62 436 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 KRT34O76011 436 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 C1QAP02745 245 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 C4BPAP04003 597 aaKnown RBP16.39■□□□□ 0.21
MBD1-222ENST00000590208 TPP2P29144 1249 aaPredicted RBP16.39■□□□□ 0.21
MBD1-222ENST00000590208 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 ABTB1Q969K4 478 aaPredicted RBP16.39■□□□□ 0.21
MBD1-222ENST00000590208 ZNF778Q96MU6 729 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 GRIP2Q9C0E4 1043 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 EHMT1Q9H9B1 1298 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 SMYD2Q9NRG4 433 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 PTTG2Q9NZH5 202 aa16.39■□□□□ 0.21
MBD1-222ENST00000590208 A0A0J9YVX5 310 aa16.38■□□□□ 0.21
MBD1-222ENST00000590208 ITM2AO43736 263 aa16.38■□□□□ 0.21
MBD1-222ENST00000590208 ITGBL1O95965 494 aaPredicted RBP16.38■□□□□ 0.21
MBD1-222ENST00000590208 AOC1P19801 751 aa16.38■□□□□ 0.21
MBD1-222ENST00000590208 NLRP11P59045 1033 aaKnown RBP16.38■□□□□ 0.21
MBD1-222ENST00000590208 TAF5Q15542 800 aa16.38■□□□□ 0.21
MBD1-222ENST00000590208 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
MBD1-222ENST00000590208 ARFGAP1Q8N6T3 406 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms