RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.36
DNMT1-221ENST00000589538 GMIPQ9P107 970 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 TMEM63CQ9P1W3 806 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 APEX2Q9UBZ4 518 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 CHORDC1Q9UHD1 332 aaPredicted RBP17.33■□□□□ 0.36
DNMT1-221ENST00000589538 TSPAN16Q9UKR8 245 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 CNTN6Q9UQ52 1028 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 CCL26Q9Y258 94 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 SIT1Q9Y3P8 196 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 ZNF318Q5VUA4 2279 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 MYO16Q9Y6X6 1858 aa17.33■□□□□ 0.36
DNMT1-221ENST00000589538 ZDBF2Q9HCK1 2354 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 XPO1O14980 1071 aaKnown RBP17.32■□□□□ 0.36
DNMT1-221ENST00000589538 LETM1O95202 739 aaPredicted RBP17.32■□□□□ 0.36
DNMT1-221ENST00000589538 SETSIPP0DME0 302 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 PON1P27169 355 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 MAGEA9P43362 315 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 KPNA1P52294 538 aaPredicted RBP17.32■□□□□ 0.36
DNMT1-221ENST00000589538 MYL5Q02045 173 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 MTF1Q14872 753 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 ZNF77Q15935 545 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 CNGA2Q16280 664 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 GOLGA7BQ2TAP0 167 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 LCLAT1Q6UWP7 414 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 TADA2BQ86TJ2 420 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 ARHGAP18Q8N392 663 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 ANKRD20A12PQ8NF67 263 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 PJA1Q8NG27 643 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 SH3RF2Q8TEC5 729 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 KAT5Q92993 513 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 KREMEN1Q96MU8 473 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 GKN1Q9NS71 199 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 SAMSN1Q9NSI8 373 aaKnown RBP17.32■□□□□ 0.36
DNMT1-221ENST00000589538 PIAS3Q9Y6X2 628 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 COL4A2P08572 1712 aa17.32■□□□□ 0.36
DNMT1-221ENST00000589538 O00370 1275 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 PES1O00541 588 aaKnown RBP17.31■□□□□ 0.36
DNMT1-221ENST00000589538 MED7O43513 233 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 MBL2P11226 248 aaPredicted RBP17.31■□□□□ 0.36
DNMT1-221ENST00000589538 KRT5P13647 590 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 SLC9A1P19634 815 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 ZNF132P52740 706 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 AMPD2Q01433 879 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 TYRO3Q06418 890 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 UBXN2BQ14CS0 331 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 ITPRIPL2Q3MIP1 535 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 HSP90AA4PQ58FG1 418 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 MIIPQ5JXC2 388 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 CDKAL1Q5VV42 579 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
DNMT1-221ENST00000589538 GPRIN1Q7Z2K8 1008 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 CCDC186Q7Z3E2 898 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 RALGPS2Q86X27 583 aaPredicted RBP17.31■□□□□ 0.36
DNMT1-221ENST00000589538 TMEM105Q8N8V8 129 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 OSCP1Q8WVF1 389 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 EXOC4Q96A65 974 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 CDK5RAP1Q96SZ6 601 aaKnown RBP17.31■□□□□ 0.36
DNMT1-221ENST00000589538 FAM83CQ9BQN1 747 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 NACA2Q9H009 215 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 IRF2BPLQ9H1B7 796 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 LTB4R2Q9NPC1 389 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
DNMT1-221ENST00000589538 USP3Q9Y6I4 520 aa17.31■□□□□ 0.36
DNMT1-221ENST00000589538 MIA3Q5JRA6 1907 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 LEFTY2O00292 366 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 SLC9A3R1O14745 358 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-221ENST00000589538 PLA2G4AP47712 749 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 IFNAR2P48551 515 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 RUNX3Q13761 415 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 MEA1Q16626 185 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 KLHL40Q2TBA0 621 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 RAB41Q5JT25 222 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 IER5LQ5T953 404 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 KLHDC10Q6PID8 442 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 C11orf57Q6ZUT1 292 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-221ENST00000589538 PIGZQ86VD9 579 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 TTC30AQ86WT1 665 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 ZNF276Q8N554 614 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 FAM3CQ92520 227 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 ATP2A3Q93084 1043 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 ZFYVE19Q96K21 471 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 RNF38Q9H0F5 515 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 LRRC4Q9HBW1 653 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 CYLDQ9NQC7 956 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 DUS2Q9NX74 493 aaKnown RBP17.3■□□□□ 0.36
DNMT1-221ENST00000589538 CPQQ9Y646 472 aa17.3■□□□□ 0.36
DNMT1-221ENST00000589538 FAM170BA6NMN3 283 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 RNF225M0QZC1 329 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-221ENST00000589538 CYP26A1O43174 497 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 COCHO43405 550 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 GALR2O43603 387 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-221ENST00000589538 TLR5O60602 858 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 RALAP11233 206 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 PDE4CQ08493 712 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 GOLGA8FQ08AF8 430 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 GOLGA8DPQ0D2H9 430 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 NR1H3Q13133 447 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 CPA6Q8N4T0 437 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 KCTD13Q8WZ19 329 aa17.29■□□□□ 0.36
DNMT1-221ENST00000589538 FOXQ1Q9C009 403 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms