RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 CYLDQ9NQC7 956 aa18.54■□□□□ 0.56
H3F3B-207ENST00000589417 GKN1Q9NS71 199 aa18.54■□□□□ 0.56
H3F3B-207ENST00000589417 TSPAN16Q9UKR8 245 aa18.54■□□□□ 0.56
H3F3B-207ENST00000589417 MRPS17Q9Y2R5 130 aaKnown RBP18.54■□□□□ 0.56
H3F3B-207ENST00000589417 PCDHB4Q9Y5E5 795 aa18.54■□□□□ 0.56
H3F3B-207ENST00000589417 DENND4CQ5VZ89 1909 aa18.54■□□□□ 0.56
H3F3B-207ENST00000589417 XPO1O14980 1071 aaKnown RBP18.53■□□□□ 0.56
H3F3B-207ENST00000589417 SLC9A1P19634 815 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 PSEN1P49768 467 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 BCAT1P54687 386 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 SLC8A3P57103 927 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 FZD5Q13467 585 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 MTF1Q14872 753 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 PDGFRLQ15198 375 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 STX1AQ16623 288 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 MEA1Q16626 185 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 DPY19L2P1Q6NXN4 242 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 KLHDC10Q6PID8 442 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 TPRG1Q6ZUI0 275 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 PIGZQ86VD9 579 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 RALGPS2Q86X27 583 aaPredicted RBP18.53■□□□□ 0.56
H3F3B-207ENST00000589417 CREBRFQ8IUR6 639 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 CSGALNACT1Q8TDX6 532 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 SH3RF2Q8TEC5 729 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 OSCP1Q8WVF1 389 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 TFAP2BQ92481 460 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 CRACR2AQ9BSW2 395 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 UBE2TQ9NPD8 197 aaPredicted RBP18.53■□□□□ 0.56
H3F3B-207ENST00000589417 TLR8Q9NR97 1041 aaKnown RBP18.53■□□□□ 0.56
H3F3B-207ENST00000589417 GMIPQ9P107 970 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 APEX2Q9UBZ4 518 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 F5P12259 2224 aa18.53■□□□□ 0.56
H3F3B-207ENST00000589417 KCNJ18B7U540 433 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 COCHO43405 550 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 GALR2O43603 387 aaPredicted RBP18.52■□□□□ 0.56
H3F3B-207ENST00000589417 MAGEA9P43362 315 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 PLA2G4AP47712 749 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 MFAP3P55082 362 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 BST2Q10589 180 aaKnown RBP18.52■□□□□ 0.56
H3F3B-207ENST00000589417 IFRD2Q12894 506 aaPredicted RBP18.52■□□□□ 0.56
H3F3B-207ENST00000589417 KCNJ12Q14500 433 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 ITPRIPL2Q3MIP1 535 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 PM20D1Q6GTS8 502 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 CC2D1AQ6P1N0 951 aaPredicted RBP18.52■□□□□ 0.56
H3F3B-207ENST00000589417 DDX42Q86XP3 938 aaKnown RBP eCLIP18.52■□□□□ 0.564e-9■□□□□ 9.6
H3F3B-207ENST00000589417 CCDC105Q8IYK2 499 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 SCML4Q8N228 414 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 RBBP8NLQ8NC74 664 aaPredicted RBP18.52■□□□□ 0.56
H3F3B-207ENST00000589417 KCTD13Q8WZ19 329 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 ZFYVE19Q96K21 471 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 ZSWIM1Q9BR11 485 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 HPS4Q9NQG7 708 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 CLIC5Q9NZA1 410 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 HESX1Q9UBX0 185 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 PIAS3Q9Y6X2 628 aa18.52■□□□□ 0.56
H3F3B-207ENST00000589417 MUC6Q6W4X9 2439 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 LEFTY2O00292 366 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 STK25O00506 426 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 SETSIPP0DME0 302 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 CD19P15391 556 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 RPS9P46781 194 aaKnown RBP18.51■□□□□ 0.55
H3F3B-207ENST00000589417 PGFP49763 221 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 PDE4CQ08493 712 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 RUNX3Q13761 415 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 GOLGA7BQ2TAP0 167 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 MAMSTRQ6ZN01 415 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 C11orf57Q6ZUT1 292 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-207ENST00000589417 SLC35F5Q8WV83 523 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 FAM3CQ92520 227 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 SHC3Q92529 594 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 ZFRQ96KR1 1074 aaKnown RBP18.51■□□□□ 0.55
H3F3B-207ENST00000589417 FOXQ1Q9C009 403 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 SIX2Q9NPC8 291 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 GTSE1Q9NYZ3 720 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 RAPGEFL1Q9UHV5 662 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.51■□□□□ 0.55
H3F3B-207ENST00000589417 OBSL1O75147 1896 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 COL4A2P08572 1712 aa18.51■□□□□ 0.55
H3F3B-207ENST00000589417 LRRC10BA6NIK2 292 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 FAM170BA6NMN3 283 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 NCAM2O15394 837 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 TLR5O60602 858 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 ABL1P00519 1130 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 RFX1P22670 979 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 TARSP26639 723 aaKnown RBP18.5■□□□□ 0.55
H3F3B-207ENST00000589417 RPL34P49207 117 aaKnown RBP18.5■□□□□ 0.55
H3F3B-207ENST00000589417 TNK2Q07912 1038 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 KCNMA1Q12791 1236 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 SCD5Q86SK9 330 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 DTWD2Q8NBA8 298 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 PRSS33Q8NF86 280 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 IRF2BPLQ9H1B7 796 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 CCSER2Q9H7U1 834 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 NMUR1Q9HB89 426 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.5■□□□□ 0.55
H3F3B-207ENST00000589417 OSER1Q9NX31 292 aa18.5■□□□□ 0.55
H3F3B-207ENST00000589417 DUS2Q9NX74 493 aaKnown RBP18.5■□□□□ 0.55
H3F3B-207ENST00000589417 MTF2Q9Y483 593 aaPredicted RBP18.5■□□□□ 0.55
H3F3B-207ENST00000589417 CPQQ9Y646 472 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms