RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 CHMP5Q9NZZ3 219 aa11.23□□□□□ -0.61
CLPTM1-211ENST00000589347 ARMCX3Q9UH62 379 aaPredicted RBP11.23□□□□□ -0.61
CLPTM1-211ENST00000589347 SMG5Q9UPR3 1016 aaKnown RBP11.23□□□□□ -0.61
CLPTM1-211ENST00000589347 CCL26Q9Y258 94 aa11.23□□□□□ -0.61
CLPTM1-211ENST00000589347 IGF2RP11717 2491 aa11.23□□□□□ -0.61
CLPTM1-211ENST00000589347 C2orf78A6NCI8 922 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 SLC9A3R1O14745 358 aaPredicted RBP11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 CD58P19256 250 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 ADORA2BP29275 332 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 NRLP54845 237 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 USP46P62068 366 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 UBE2HP62256 183 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 CSTF1Q05048 431 aaKnown RBP11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 TNK2Q07912 1038 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 CETN1Q12798 172 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 TAF10Q12962 218 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 ORC1Q13415 861 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 ACAP1Q15027 740 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 PON2Q15165 354 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 C1orf220Q5T0J3 134 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 KLHL10Q6JEL2 608 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 ZC3H3Q8IXZ2 948 aaKnown RBP11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 CRYBG2Q8N1P7 616 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 SYNPOQ8N3V7 929 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 KIAA1958Q8N8K9 716 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 TTC8Q8TAM2 541 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 SLC2A14Q8TDB8 520 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 ATRIPQ8WXE1 791 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 NACA2Q9H009 215 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 EBF3Q9H4W6 596 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 PNPLA8Q9NP80 782 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 PARD6AQ9NPB6 346 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.617e-11■■■■■ 260.8
CLPTM1-211ENST00000589347 FAM49BQ9NUQ9 324 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 RAB20Q9NX57 234 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 GCNT4Q9P109 453 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 HMGXB4Q9UGU5 601 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 MAN1B1Q9UKM7 699 aa11.22□□□□□ -0.61
CLPTM1-211ENST00000589347 MYO18AQ92614 2054 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 NBEAQ8NFP9 2946 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 TRIM49BA6NDI0 452 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 ZNF840PA6NDX5 716 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 SLC30A4O14863 429 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 CILPO75339 1184 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 OLFM2O95897 454 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 OAS1P00973 400 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 MBL2P11226 248 aaPredicted RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 CHRNB1P11230 501 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 TBXAS1P24557 533 aaPredicted RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 TUBP50607 506 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 CACNA2D1P54289 1103 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 MAP3K7CLP57077 242 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 SLC8A3P57103 927 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 SLC7A9P82251 487 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 GOLGA8FQ08AF8 430 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 GOLGA8DPQ0D2H9 430 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 MTAPQ13126 283 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 PPM1JQ5JR12 505 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 ANKRD40Q6AI12 368 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 TRIM68Q6AZZ1 485 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 FOXR2Q6PJQ5 311 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 FUKQ8N0W3 1084 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 TRIML1Q8N9V2 468 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 CCDC26Q8TAB7 109 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 ERCC4Q92889 916 aaPredicted RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 SECISBP2LQ93073 1101 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 ELMO3Q96BJ8 720 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 LRRC3BQ96PB8 259 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 FAM83CQ9BQN1 747 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 APOBEC3GQ9HC16 384 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 HPS4Q9NQG7 708 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 TLR8Q9NR97 1041 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 ZSCAN32Q9NX65 697 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 CTNND2Q9UQB3 1225 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 CPQQ9Y646 472 aa11.21□□□□□ -0.61
CLPTM1-211ENST00000589347 DSPP15924 2871 aaKnown RBP11.21□□□□□ -0.62
CLPTM1-211ENST00000589347 WDFY3Q8IZQ1 3526 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 LEFTY2O00292 366 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 GNA14O95837 355 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 DRD1P21728 446 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 CXCL12P48061 93 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 MCCD1P59942 119 aaPredicted RBP11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 PAK1Q13153 545 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 FBXO43Q4G163 708 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 HECTD3Q5T447 861 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 TXNDC11Q6PKC3 985 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 MAMSTRQ6ZN01 415 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 TADA2BQ86TJ2 420 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 NETO1Q8TDF5 533 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 NELFBQ8WX92 580 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 CYFIP2Q96F07 1278 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 SLC22A12Q96S37 553 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 CYP2S1Q96SQ9 504 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 HNRNPABQ99729 332 aaKnown RBP11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 P2RY13Q9BPV8 354 aa11.2□□□□□ -0.62
CLPTM1-211ENST00000589347 ECT2Q9H8V3 914 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms