RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TBX2Q13207 712 aaPredicted RBP9.54□□□□□ -0.88
CIRBP-218ENST00000588344 MTMR3Q13615 1198 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 PMF1Q6P1K2 205 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 DENND1BQ6P3S1 775 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 KLHDC10Q6PID8 442 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 GAREM2Q75VX8 874 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 MTSS1LQ765P7 747 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 BEND5Q7L4P6 421 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 TMC6Q7Z403 805 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 ERICH1Q86X53 443 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.54□□□□□ -0.88
CIRBP-218ENST00000588344 KIAA1958Q8N8K9 716 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 TDRD5Q8NAT2 981 aaKnown RBP9.54□□□□□ -0.88
CIRBP-218ENST00000588344 C1orf131Q8NDD1 294 aaKnown RBP9.54□□□□□ -0.88
CIRBP-218ENST00000588344 SCAMP5Q8TAC9 235 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 SHKBP1Q8TBC3 707 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 IPO4Q8TEX9 1081 aaKnown RBP9.54□□□□□ -0.88
CIRBP-218ENST00000588344 FGF13Q92913 245 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 VCPIP1Q96JH7 1222 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 DNAJC7Q99615 494 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 SYNCQ9H7C4 482 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 TRPV4Q9HBA0 871 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 ACP6Q9NPH0 428 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 ST7Q9NRC1 585 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 EYSQ5T1H1 3165 aa9.54□□□□□ -0.88
CIRBP-218ENST00000588344 COL6A3P12111 3177 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 MYO9BQ13459 2157 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 TRAV19A0A0A6YYK7 116 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 AP5Z1O43299 807 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 MFAP3LO75121 409 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 MOSPD3O75425 235 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 ADCY5O95622 1261 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 CYP1A1P04798 512 aaPredicted RBP9.53□□□□□ -0.88
CIRBP-218ENST00000588344 USP17L7P0C7H9 530 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 LAMP2P13473 410 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 HDCP19113 662 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 GBP2P32456 591 aaPredicted RBP9.53□□□□□ -0.88
CIRBP-218ENST00000588344 SCNN1AP37088 669 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 AVPR1AP37288 418 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 CCR2P41597 374 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 NSFP46459 744 aaKnown RBP9.53□□□□□ -0.88
CIRBP-218ENST00000588344 GABRB2P47870 512 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 MRE11P49959 708 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 USP46P62068 366 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 CDK17Q00537 523 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 FMO1Q01740 532 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 PDCLQ13371 301 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 PTPN21Q16825 1174 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 SLC5A9Q2M3M2 681 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 EFHC1Q5JVL4 640 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 HECTD3Q5T447 861 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 GPR158Q5T848 1215 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 TAF3Q5VWG9 929 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 TOGARAM2Q6ZUX3 1019 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 GET4Q7L5D6 327 aaPredicted RBP9.53□□□□□ -0.88
CIRBP-218ENST00000588344 SCUBE3Q8IX30 993 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 WDTC1Q8N5D0 677 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 ITFG1Q8TB96 612 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 SMARCD2Q92925 531 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 C18orf8Q96DM3 657 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 SLITRK6Q9H5Y7 841 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 HAUS4Q9H6D7 363 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 GRPEL1Q9HAV7 217 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 ZNF334Q9HCZ1 680 aaPredicted RBP9.53□□□□□ -0.88
CIRBP-218ENST00000588344 ABCC13Q9NSE7 274 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 OLA1Q9NTK5 396 aaKnown RBP9.53□□□□□ -0.88
CIRBP-218ENST00000588344 ABHD10Q9NUJ1 306 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 ASNSD1Q9NWL6 643 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 OBP2AQ9NY56 170 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 IGSF9Q9P2J2 1179 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 WDR35Q9P2L0 1181 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 CHORDC1Q9UHD1 332 aaPredicted RBP9.53□□□□□ -0.88
CIRBP-218ENST00000588344 STRIP2Q9ULQ0 834 aa9.53□□□□□ -0.88
CIRBP-218ENST00000588344 REV3LO60673 3130 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 SSU72P8A0A1W2PR75 194 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 LOC730098B7Z3J9 87 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 TULP2O00295 520 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ABL1P00519 1130 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 CALCAP01258 141 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 UNGP13051 313 aaPredicted RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 LCP1P13796 627 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 IL9P15248 144 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 CHRNB2P17787 502 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 MMP8P22894 467 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ATP5C1P36542 298 aaKnown RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 RGS7P49802 495 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 KCNQ1P51787 676 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 KPNA1P52294 538 aaPredicted RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 DAOAP59103 153 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 YWHAGP61981 247 aaKnown RBP eCLIP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 NOMO3P69849 1222 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 C1QBPQ07021 282 aaKnown RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 GOLGA8FQ08AF8 430 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 GOLGA8DPQ0D2H9 430 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ADIGQ0VDE8 80 aa9.52□□□□□ -0.89
CIRBP-218ENST00000588344 ZNF268Q14587 947 aaPredicted RBP9.52□□□□□ -0.89
CIRBP-218ENST00000588344 TEAD2Q15562 447 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms