RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ADH5P11766 374 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 ITPKAP23677 461 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 GRIA2P42262 883 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 PGFP49763 221 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 LMAN2Q12907 356 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 SPDYCQ5MJ68 293 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 LY6G5CQ5SRR4 150 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 SNX30Q5VWJ9 437 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 KIAA1211LQ6NV74 962 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 PAQR9Q6ZVX9 377 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 LPCAT2Q7L5N7 544 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 B3GNT5Q9BYG0 378 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 CAPN10Q9HC96 672 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 ARHGEF4Q9NR80 690 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 IL37Q9NZH6 218 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 KLK13Q9UKR3 277 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 NEUROG3Q9Y4Z2 214 aa14.69□□□□□ -0.06
CLPTM1-208ENST00000588274 A0A1W2PQF6 199 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 TCRBV21S2A2A0A5A6 115 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 E2F8A0AVK6 867 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 FAM92AA1XBS5 289 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 ZNF233A6NK53 670 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 TRIM24O15164 1050 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 STAU1O95793 577 aaKnown RBP14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 TNNC2P02585 160 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 ZDHHC11BP0C7U3 371 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 PTPN1P18031 435 aaKnown RBP14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 GABRG2P18507 467 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 ANXA13P27216 316 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 HOXD12P35452 270 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 TNFRSF4P43489 277 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 FAM193AP78312 1265 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 EHHADHQ08426 723 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 DUOXA2Q1HG44 320 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 UAP1L1Q3KQV9 507 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 LYSMD4Q5XG99 296 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 CCDC73Q6ZRK6 1079 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 NOC3LQ8WTT2 800 aaKnown RBP14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 HMGB4Q8WW32 186 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 ZNF516Q92618 1163 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 P2RY11Q96G91 374 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 USP28Q96RU2 1077 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 ELOVL4Q9GZR5 314 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 AGPAT3Q9NRZ7 376 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 KBTBD4Q9NVX7 518 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 PCNX2A6NKB5 2137 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 PI4KAP42356 2102 aa14.68□□□□□ -0.06
CLPTM1-208ENST00000588274 ANKRD11Q6UB99 2663 aaPredicted RBP14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 ADAMTS9Q9P2N4 1935 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 SPAARA0A1B0GVQ0 90 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 VPS37CA5D8V6 355 aaPredicted RBP14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 FAM221BA6H8Z2 402 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 SLC9A3R1O14745 358 aaPredicted RBP14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 TULP3O75386 442 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 ALDH1A2O94788 518 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 ADH1CP00326 375 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 APODP05090 189 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 FAM163BP0C2L3 166 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 MBL2P11226 248 aaPredicted RBP14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 STAT6P42226 847 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 MAPK8P45983 427 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 CYP24A1Q07973 514 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 COL9A2Q14055 689 aaPredicted RBP14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 PSMD6Q15008 389 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 SNRNP35Q16560 246 aaKnown RBP14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 EOGTQ5NDL2 527 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 TTC30AQ86WT1 665 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 BBS7Q8IWZ6 715 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 TERB1Q8NA31 727 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 B3GALNT2Q8NCR0 500 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 ZMIZ2Q8NF64 920 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 SCAMP5Q8TAC9 235 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 PLEKHO2Q8TD55 490 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 ZCCHC14Q8WYQ9 949 aaKnown RBP14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 OVCA2Q8WZ82 227 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 SPACA7Q96KW9 195 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 KCNK16Q96T55 309 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 MMS19Q96T76 1030 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 CGRRF1Q99675 332 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 PANK2Q9BZ23 570 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 TRIM9Q9C026 710 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 CCSER2Q9H7U1 834 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 POLMQ9NP87 494 aaPredicted RBP14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 CD93Q9NPY3 652 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 EHD2Q9NZN4 543 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 CALCOCO1Q9P1Z2 691 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 GON4LQ3T8J9 2241 aa14.67□□□□□ -0.06
CLPTM1-208ENST00000588274 MYO18AQ92614 2054 aaKnown RBP14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 IGHV1OR15-9A0A0B4J2B8 117 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 TAF4O00268 1085 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 EIF3DO15371 548 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 GJB3O75712 270 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 GNL1P36915 607 aaPredicted RBP14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 TUBP50607 506 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 SLC5A3P53794 718 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 SLC39A14Q15043 492 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 SURF1Q15526 300 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 TDRD10Q5VZ19 366 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms