RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ARHGAP40Q5TG30 622 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 ZNF782Q6ZMW2 699 aaPredicted RBP5.24□□□□□ -1.57
VMP1-205ENST00000587470 ZNF804AQ7Z570 1209 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 C1QL2Q7Z5L3 287 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 C1QTNF7Q9BXJ2 289 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 SEMA4CQ9C0C4 833 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 SLC12A5Q9H2X9 1139 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 ARMT1Q9H993 441 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 CNNM1Q9NRU3 951 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 DLL3Q9NYJ7 618 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 SH3BP4Q9P0V3 963 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 RNF7Q9UBF6 113 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 PNMA8BQ9ULN7 279 aaPredicted RBP5.24□□□□□ -1.57
VMP1-205ENST00000587470 MED16Q9Y2X0 877 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 METP08581 1390 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 GLI3P10071 1580 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 CAMTA1Q9Y6Y1 1673 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 DISP2A7MBM2 1401 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 PTPRUQ92729 1446 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 KIF1BO60333 1816 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 A0A088AWK7 358 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 WDR91A4D1P6 747 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 H0YIZ8 118 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 ZNF213O14771 459 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 PPM1GO15355 546 aaPredicted RBP5.23□□□□□ -1.57
VMP1-205ENST00000587470 ZNF81P51508 661 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 SATB1Q01826 763 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 SP2Q02086 613 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 PROSER3Q2NL68 480 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 SLC44A4Q53GD3 710 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 PLBD2Q8NHP8 589 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 REPS1Q96D71 796 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 CAMKK2Q96RR4 588 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 DUSP22Q9NRW4 184 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 PIH1D1Q9NWS0 290 aaKnown RBP5.23□□□□□ -1.57
VMP1-205ENST00000587470 XPR1Q9UBH6 696 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 SHOC2Q9UQ13 582 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 TMX2Q9Y320 296 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.23□□□□□ -1.57
VMP1-205ENST00000587470 PARD3Q8TEW0 1356 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 NRXN1Q9ULB1 1477 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 RGPD1P0DJD0 1748 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.23□□□□□ -1.57
VMP1-205ENST00000587470 NRXN3Q9Y4C0 1643 aa5.23□□□□□ -1.57
VMP1-205ENST00000587470 E2F8A0AVK6 867 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 AP1G1O43747 822 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 LATS1O95835 1130 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 CYP2C9P11712 490 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 XRCC6P12956 609 aaKnown RBP eCLIP5.22□□□□□ -1.578e-25■■■□□ 15.3
VMP1-205ENST00000587470 LRPAP1P30533 357 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 CLCN2P51788 898 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 PDE1AP54750 535 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 ANAPC15P60006 121 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 ZNF267Q14586 743 aaPredicted RBP5.22□□□□□ -1.57
VMP1-205ENST00000587470 PCID2Q5JVF3 399 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 RGS7BPQ6MZT1 257 aaPredicted RBP5.22□□□□□ -1.57
VMP1-205ENST00000587470 PARS2Q7L3T8 475 aaKnown RBP5.22□□□□□ -1.57
VMP1-205ENST00000587470 LRRC71Q8N4P6 559 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 CELF5Q8N6W0 485 aaKnown RBP5.22□□□□□ -1.57
VMP1-205ENST00000587470 VGLL2Q8N8G2 317 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 RP9Q8TA86 221 aaKnown RBP5.22□□□□□ -1.57
VMP1-205ENST00000587470 DIS3LQ8TF46 1054 aaKnown RBP5.22□□□□□ -1.57
VMP1-205ENST00000587470 SCARB1Q8WTV0 552 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 ATG4AQ8WYN0 398 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 ZNF778Q96MU6 729 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 GLOD4Q9HC38 313 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 ZNF70Q9UC06 446 aaPredicted RBP5.22□□□□□ -1.57
VMP1-205ENST00000587470 CPA4Q9UI42 421 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 NDRG4Q9ULP0 352 aaKnown RBP5.22□□□□□ -1.57
VMP1-205ENST00000587470 PIK3C2GO75747 1445 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 ZNF804BA4D1E1 1349 aa5.22□□□□□ -1.57
VMP1-205ENST00000587470 MARF1Q9Y4F3 1742 aaKnown RBP5.21□□□□□ -1.58
VMP1-205ENST00000587470 A1L4Q6 167 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 H3BML4 177 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 MYO1CO00159 1063 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 FESP07332 822 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 CERS1P27544 350 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 SLC11A2P49281 568 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 UCP3P55916 312 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 RAB1AP62820 205 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 SSBP2P81877 361 aaPredicted RBP5.21□□□□□ -1.58
VMP1-205ENST00000587470 MCL1Q07820 350 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 TTF1Q15361 905 aaPredicted RBP5.21□□□□□ -1.58
VMP1-205ENST00000587470 DENND1CQ8IV53 801 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 ANKRD13AQ8IZ07 590 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 GLG1Q92896 1179 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 MRGPRX1Q96LB2 322 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 AIFM3Q96NN9 605 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 SYT17Q9BSW7 474 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 RHOBTB2Q9BYZ6 727 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 COL22A1Q8NFW1 1626 aaPredicted RBP5.21□□□□□ -1.58
VMP1-205ENST00000587470 SLIT2O94813 1529 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 PPLO60437 1756 aa5.21□□□□□ -1.58
VMP1-205ENST00000587470 MYOM2P54296 1465 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 ABCC11Q96J66 1382 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 hCG_2014768A0A024R1R8 64 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 ERC2O15083 957 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 PRR35P0CG20 571 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 WNT3P56703 355 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 KRTAP10-9P60411 292 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms